Gene Sfri_3493 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_3493 
Symbol 
ID4280387 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand
Start bp4155116 
End bp4155754 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content37% 
IMG OID638136306 
Producthypothetical protein 
Protein accessionYP_752160 
Protein GI114564646 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGGCATG AACCTAATGA TTTTTGTGAA AAACTTAAAC AAAGTGCTAC TCCAAAAATG 
GCAAAAACAA TAGATTTAAT TCATCAGATA TGTACCGAAC AGTCTGAACG AGGGTCCTGT
GATTTTACAA TAGCCACAAT TGGCCGTTTA AGTGAAGCTG TTAACGGTCC AAAGGCTCAG
GCTATCAGAA ATAAAACAGG CGAAAAATAC CGCGCACTCA TCCAATCATG GGCAGAGTTT
AAAAAACCCT TAAAAGTTAT CTCAAGCAAA GTAAAAGAAC AAAATGCATG GGTTGGTGAT
ATTGATGATG CCCGTATCAA ATGGCTCGTA ATGGACTTAA TTGCACAAAA TAGTAAGTTA
ACAGGGCAGC TACAATTAGC AAAAGAGCTA TCAAATATTA ATATTGATCT AAGGCCATCA
GCTAATAACA ATGCAATGGA AAGTTCATCT CATCCATCTT TAACTAAGTC GAATCTACTC
CCAACTGAAG TAGAAGCATT ATCACACTCT ATTAACCCAG ATACATTTGA AAAAAATGGG
TGGACACCAG ATAAGCAGGG AAGAGTTAAA GATAGTGAGG GTAATACAAT ATTCAAAGCA
GGTTTTGTCG ATGCGATTGA AAAAACGTTG TCTTTGTAA
 
Protein sequence
MRHEPNDFCE KLKQSATPKM AKTIDLIHQI CTEQSERGSC DFTIATIGRL SEAVNGPKAQ 
AIRNKTGEKY RALIQSWAEF KKPLKVISSK VKEQNAWVGD IDDARIKWLV MDLIAQNSKL
TGQLQLAKEL SNINIDLRPS ANNNAMESSS HPSLTKSNLL PTEVEALSHS INPDTFEKNG
WTPDKQGRVK DSEGNTIFKA GFVDAIEKTL SL