Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_3488 |
Symbol | |
ID | 4280382 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | - |
Start bp | 4151239 |
End bp | 4152897 |
Gene Length | 1659 bp |
Protein Length | 552 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 638136301 |
Product | putative mercuric reductase |
Protein accession | YP_752155 |
Protein GI | 114564641 |
COG category | [C] Energy production and conversion [P] Inorganic ion transport and metabolism |
COG ID | [COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes [COG2608] Copper chaperone |
TIGRFAM ID | [TIGR02053] mercuric reductase |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.852286 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTTTAT TATCCATACG CTTATCCATA CAAGGGATGA GCTGCCCAAG CTCCGTCGAA CACATTAAAG AGGCGCTCGA TGCCGTTGAA GGCGTCATTA AAACTGAGGT GTCTTATGCA AAAGCCCTAG CTGTGATCAC CACAAGAGAT GGTGTCAATG TAGCAGAACT GATCCTAGCG ATTAATGCCT TAGGCTACGT TGCAACAGAG CTTAAAGACA CGACAAGGTG TGGCGACACT GACCAGCAAG AAGACATTAG CCCTCAGCAA CGGGTCGCCA TCATAGGCAG CGGTTCTGGC GCTTTTGCCT GCGCCATCAA GGCAGCGGAG CGTGGCGCAC AGGTTACCAT TATTGAAGCA AGCGAGGTGA TCGGCGGCTG TTGTGTCAAT GTTGGCTGTG TGCCGTCCAA AATTTTAATT CGAGCGGCGC AATTGGCTCA GCAACAGCGA AGCAACCCGT TTGCAGGACT GGAAAATCAT GCCCCAGAAC TGAGTCGAGC GCGCTTATCC GAGCAGCAGA CCGCGCGGGT GGAAGAATTG CGGGCAGCCA AATACCAGAA TATTCTAGAC AATAATCCCG CACTGAGTTT AATTAAAGGG TTTGCACGAT TTAACGATGC CAATACCTTA ATCATCCGTA AAGTCGATGG TTCAGAGCTA GTGCTGCATG CCGATAAAAT ATTAATTGCC ACCGGTTCGA CGCCGACGAT CCCGCCGATT GATGGTCTTG CCGGCACCCC TTACTGGACA TCCACAGAAG CATTATTTGC CAAAGCGCTG CCACAACATC TGATCGTGAT TGGCTCCTCT GTGGTCGCGT TGGAGATAGC ACAAGCTTAT CGCCGCTTAG GTAGCGAGGT GACGGTATTG GCGCGGCATT CATTACTGTA TGCAGAAGAC CCCTTGCTAG GTGAGAAACT TAGCGAATGT TTTGAAAAAG AAGGCATTAA CGTGTTGAAT CACACTCAGG CGGCAAGCGT TTCATATCAA GGAGAACAAT TTACGCTGGA AACCAATGCG GGAACGTTAA TTGGTGATCA ACTGTTGATC AGTACCGGGC GTAATGCCAA TACCAGCCAA CTTAATCTTG CCGCAATCGG TGTTAAAACC AACCAGGGCG GTGAGGTTAT CGTCAATGAA CGAATGGAGA CCAATATTTC CGGCATTTAT GCCGCCGGAG ACTGTTCCAA TATGCCGCAA TTTGTCTATG TTGCTGCCGC AGCTGGCAGT CGTGCTGCTG TGAATATGAT AGGTGGCGAC GCCAAACTGG ATCTCACCAC TATGCCCGCG GTGATTTTTA CCGATCCGCA AGTCGCCACT GTGGGTTTAA CCGAAGTACA GGCCAAGGCG CAAGATATTG AGACGGACAG TCGAGTCTTG GGCATGGAAA ATGTGCCACG AGCCCTGGCC AACTTCGAGA CCGACGGCTT CATTAAATTA GTGGCAGAAA AGAAAACCGG TCGAATTATC GGAGCGCAAA TATTGGCGCA TGAAGGCGGT GAAATAATTC AGAGTGCAGC ATTGGCCATT CGCAATCGCA TGACAGTCAC TGAGCTAGCG GATCAACTCT TCCCCTACCT GACCATGGTG GAAGGACTAA AACTCTGCGC GCAGACCTTT AACAAGGATG TTAAAGCACT CTCCTGCTGC GCCGGGTAA
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Protein sequence | MILLSIRLSI QGMSCPSSVE HIKEALDAVE GVIKTEVSYA KALAVITTRD GVNVAELILA INALGYVATE LKDTTRCGDT DQQEDISPQQ RVAIIGSGSG AFACAIKAAE RGAQVTIIEA SEVIGGCCVN VGCVPSKILI RAAQLAQQQR SNPFAGLENH APELSRARLS EQQTARVEEL RAAKYQNILD NNPALSLIKG FARFNDANTL IIRKVDGSEL VLHADKILIA TGSTPTIPPI DGLAGTPYWT STEALFAKAL PQHLIVIGSS VVALEIAQAY RRLGSEVTVL ARHSLLYAED PLLGEKLSEC FEKEGINVLN HTQAASVSYQ GEQFTLETNA GTLIGDQLLI STGRNANTSQ LNLAAIGVKT NQGGEVIVNE RMETNISGIY AAGDCSNMPQ FVYVAAAAGS RAAVNMIGGD AKLDLTTMPA VIFTDPQVAT VGLTEVQAKA QDIETDSRVL GMENVPRALA NFETDGFIKL VAEKKTGRII GAQILAHEGG EIIQSAALAI RNRMTVTELA DQLFPYLTMV EGLKLCAQTF NKDVKALSCC AG
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