| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_3486 |
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| Symbol | |
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| ID | 4280381 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 4149067 |
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| End bp | 4150539 |
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| Gene Length | 1473 bp |
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| Protein Length | 490 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638136300 |
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| Product | RNA-directed DNA polymerase |
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| Protein accession | YP_752154 |
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| Protein GI | 114564640 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3344] Retron-type reverse transcriptase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGATTT CAACAGAGAT TAGTGCCTCT CCTGACGGCG AACAATGGCA GTCCATAGAC
TGGAAATCCG TTGAACCGCA TGTATTAAAG CTTCAGATGC GTATTGCAAA GGCAACACGA
GAAGGTAAAC ACGGTAAGGC GAAAGCGTTG CAATGGATAC TGACTCACTC GCGTTCAGCA
AAACTTCTTG CTGTTAAACG AGTATCAAAA AACAAAGGCA GTAGAACGCC TGGAATAGAT
GGTGTCATCT GGAACACGGA TGCACGCCGC ATGAAAGCAG TAAATCAATT GAGCAGGAAG
GCATATCAAG CCAAACCACT CAAGCGTATC TATATCCCCA AAAAGAATGG CAAACTTAGA
CCTCTTGGTA TCCCAAGCAT GATAGACAGA GCACAACAAG CGCTCCACCT TCTTGCATTA
GAGCCTATAT CGGAGACGCT TGCTGACCCA AACAGCTATG GATTTAGACC AAATCGTAGC
ACTGCCGACG CAGTCGATCA GTGCTTCAAA TGCTTGGCTC TAAAGAGATC AGCGCAATGG
GTTCTTGAGG GAGATATCAA ATCCTGCTTC GACAAAATCG GGCATCAATG GCTTGTTGAT
AACATCGCCA TAGATAAACG AATGTTGGAA CAATGGTTAA AGTCTGGTTT TATGGATAAA
GGGTTGTTTT ATCGTACTGA TGAGGGCACG CCACAAGGAG GGGTTATATC CCCAACCTTG
ATGCTAATGA CTCTTGCTGG ACTTGAACAG CGCATAAAGT CTACAGCACT CAAAAAGGGT
GCTAGAGCCA ACTTTATTGG ATACGCCGAC GATTTCGTCG TCACCTGCGC TTCAAAGGAA
GTGCTCGAGA ACGATATCAA ACCGTTGATC GCTGACTTCT TGGCGGAAAG AGGCTTAACA
CTCTCCGAAG AGAAAACGCA CATTACCCAC ATCAACAAGG GTTTTGACTT CTTAGGGTTC
AATCATAGGA AGTACAAAGG AAAATTGCTC ATTAAACCGA GTAAATCCAA CACGCTGTTG
TTCTTGAGTA ACCTGCGCGA ACTCATCAAA AAGCACGCAA CCATCCCTGT TAACGACCTT
ATCAAACTGA TAAATCCGAA ACTAAGGGGG TGGGCGAATT ATTATCGTCA TTGTGTTGCT
AAACAAGTAT TCGGGTATGT TGGGCACAAA CTATTCTATT CGTTATGGCA CTGGGCAGTA
AGGCGTCACC CAACAAAGTC TAAGACTTGG GTAGCCCTTA AATACTTCAT CAACCGAAAA
GGCCAATGGC AATTTCACGG TTGGCAGAAG GTCAAGGATA TGGATTGCCA ATTCAATCTA
TTCCAAATAG CCAAAGTGCC TATTGAGAGG CATGTGAAAA TTCGAAGTGC GGCTATACCA
TTCGATCCTC AATACCAAGA ATACTTGGCT AGGAGAAAAT CGAAAAGGCA AGCTCGTAAC
GCTTGGAATG AACCTGCTCT CACTGCTTTA TAA
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| Protein sequence | MMISTEISAS PDGEQWQSID WKSVEPHVLK LQMRIAKATR EGKHGKAKAL QWILTHSRSA
KLLAVKRVSK NKGSRTPGID GVIWNTDARR MKAVNQLSRK AYQAKPLKRI YIPKKNGKLR
PLGIPSMIDR AQQALHLLAL EPISETLADP NSYGFRPNRS TADAVDQCFK CLALKRSAQW
VLEGDIKSCF DKIGHQWLVD NIAIDKRMLE QWLKSGFMDK GLFYRTDEGT PQGGVISPTL
MLMTLAGLEQ RIKSTALKKG ARANFIGYAD DFVVTCASKE VLENDIKPLI ADFLAERGLT
LSEEKTHITH INKGFDFLGF NHRKYKGKLL IKPSKSNTLL FLSNLRELIK KHATIPVNDL
IKLINPKLRG WANYYRHCVA KQVFGYVGHK LFYSLWHWAV RRHPTKSKTW VALKYFINRK
GQWQFHGWQK VKDMDCQFNL FQIAKVPIER HVKIRSAAIP FDPQYQEYLA RRKSKRQARN
AWNEPALTAL
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