| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_3483 |
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| Symbol | |
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| ID | 4280379 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 4145409 |
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| End bp | 4146542 |
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| Gene Length | 1134 bp |
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| Protein Length | 377 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638136298 |
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| Product | phage integrase family protein |
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| Protein accession | YP_752152 |
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| Protein GI | 114564638 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.561062 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTTTGCA TTAAATCCAC ATCTGACTTT GAAATTGAAA GTGTAAAGTA CCCTAACTTT
CCCCTCTTAA CGTGGGAAGT TGATAATGCA AAGCTAGGGA TTGAATCTGG AATGCTTTGT
GTGGAAGCAA TGCAATTCCT TATTTATGAG TGCTTGAAAC GTGGGCGAGT AGACAGTGAA
AATACTTGGT GGACTTATGC CCGCCACTTA AATCAATTCC TGACATTCTG TGAACATAAC
GGTTTAGATT GGCGAAATAT TTCTGAAAGT AGTGAAGATG AAATGTTAGT CAGCGCCTAT
CGTGACCTTT GCGTTGGTGA GTTTGGCATG TCGGTCAATT CAACCAACCA ACACCTAAGA
ACGATCGTGC GGTTTTACAG TTATGGTGTT GGCAAGTGGT TTGACTCATT GCCTTACTCA
CTAGAGTCGG TTTCGGTGCG AAAGGGTCAG CAGTTTTTGG CTCATACCGA GAGAAATGGT
GGCAAAAAAT ACAGCTCGGA CTTGATGATG AAAACTTTTG AAAAGAAAGC AGAGTTTTTA
TCTGCCTATG AAGTTCAAGA ATTGTTATCT TCGATTGAAA ACCCAACGCT CAAACTGATG
GTTCGTTTAT GTCTACAGAC AGGAATTAGG CGTAAGGAGC TACTGCTTTT CCCCCTACAC
GTAATACGAA AACCTTCTGG AAACCAAACT TACTACGAAG TAAATATCTC ACGGACTAAG
GGTGAGAAAG AGCGCAAAAT ACACATTCCA TCAAGGCTAA TGGAAGATTT GTGGCGTTAT
GTAAATGAAG CTCGTTTTCA GAAGCAACAA GAATCAGGAG TGAACTCAGA TTGCCTTTTC
TTAACCTCTG ATGGTCAAGA ATGGGCTTCG CAAGGCTCTG CCTTTGGAAA GGCGCTCAAA
TCTCTGAATC TGCCCTTTCA TGTGGCTCCG CACATGTTAA GACACTCCTA TGCAACTCAC
ATGCTCAAAG GGCTCTTAGA GCGCAAAAGC AGTAAGTTTG AGCCATTGAT GTATCTACAA
AGCCGTCTTG GACATTCCAG TATTACCACC ACAATGAAAT ATTTACATCT GGTTAATGAT
TTGGTGGACG ACCTGTCGAT TGAGTATCAA CAACAAATTG ATGCAATTGT GTAG
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| Protein sequence | MLCIKSTSDF EIESVKYPNF PLLTWEVDNA KLGIESGMLC VEAMQFLIYE CLKRGRVDSE
NTWWTYARHL NQFLTFCEHN GLDWRNISES SEDEMLVSAY RDLCVGEFGM SVNSTNQHLR
TIVRFYSYGV GKWFDSLPYS LESVSVRKGQ QFLAHTERNG GKKYSSDLMM KTFEKKAEFL
SAYEVQELLS SIENPTLKLM VRLCLQTGIR RKELLLFPLH VIRKPSGNQT YYEVNISRTK
GEKERKIHIP SRLMEDLWRY VNEARFQKQQ ESGVNSDCLF LTSDGQEWAS QGSAFGKALK
SLNLPFHVAP HMLRHSYATH MLKGLLERKS SKFEPLMYLQ SRLGHSSITT TMKYLHLVND
LVDDLSIEYQ QQIDAIV
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