Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_3479 |
Symbol | |
ID | 4280375 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | + |
Start bp | 4140638 |
End bp | 4141108 |
Gene Length | 471 bp |
Protein Length | 156 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 638136294 |
Product | Tn5044 transposase |
Protein accession | YP_752148 |
Protein GI | 114564634 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4644] Transposase and inactivated derivatives, TnpA family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTGGTAA GAAAGTTGTC TGGTTATCCT TCGGGGCACC CGACATTACA GGCGCTGACG GAGTATAATC GACTGGTCAA AGCGCAATAT TTACTGGATT ACATAGACAA TGCCAGTTTG CGGCAGTACG TTCAGCGTGC TCTTAACCGG GGAGAAGCGT GGCACTTCCT GAGACGGGCT ATTGCGTCGG TAAATGGCGA TCAGTTCCGA GGCAAAAACG AGTCTGAAAT CGCTATCTGG AATGAATGTG CAAGATTGCT TGCCAACGCG ATCATCTACT TCAACTCCGC GATACTGAGT CATCTGCTGG AACACTTTGA AGCGAGAGGA GATGAAGAGA AAGCGGGTAT CACTCGTTCT GTTTCGCCCG TTGCGTGGCA AAATATCAAC TTAAGCGGAA CGTATAACTT CACTAATACT GGGAAATTGC CCGATATTGG CGAAATAACG AGGCCGATAG TGGATGATTA G
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Protein sequence | MLVRKLSGYP SGHPTLQALT EYNRLVKAQY LLDYIDNASL RQYVQRALNR GEAWHFLRRA IASVNGDQFR GKNESEIAIW NECARLLANA IIYFNSAILS HLLEHFEARG DEEKAGITRS VSPVAWQNIN LSGTYNFTNT GKLPDIGEIT RPIVDD
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