Gene Sfri_3479 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_3479 
Symbol 
ID4280375 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand
Start bp4140638 
End bp4141108 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content48% 
IMG OID638136294 
ProductTn5044 transposase 
Protein accessionYP_752148 
Protein GI114564634 
COG category[L] Replication, recombination and repair 
COG ID[COG4644] Transposase and inactivated derivatives, TnpA family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGGTAA GAAAGTTGTC TGGTTATCCT TCGGGGCACC CGACATTACA GGCGCTGACG 
GAGTATAATC GACTGGTCAA AGCGCAATAT TTACTGGATT ACATAGACAA TGCCAGTTTG
CGGCAGTACG TTCAGCGTGC TCTTAACCGG GGAGAAGCGT GGCACTTCCT GAGACGGGCT
ATTGCGTCGG TAAATGGCGA TCAGTTCCGA GGCAAAAACG AGTCTGAAAT CGCTATCTGG
AATGAATGTG CAAGATTGCT TGCCAACGCG ATCATCTACT TCAACTCCGC GATACTGAGT
CATCTGCTGG AACACTTTGA AGCGAGAGGA GATGAAGAGA AAGCGGGTAT CACTCGTTCT
GTTTCGCCCG TTGCGTGGCA AAATATCAAC TTAAGCGGAA CGTATAACTT CACTAATACT
GGGAAATTGC CCGATATTGG CGAAATAACG AGGCCGATAG TGGATGATTA G
 
Protein sequence
MLVRKLSGYP SGHPTLQALT EYNRLVKAQY LLDYIDNASL RQYVQRALNR GEAWHFLRRA 
IASVNGDQFR GKNESEIAIW NECARLLANA IIYFNSAILS HLLEHFEARG DEEKAGITRS
VSPVAWQNIN LSGTYNFTNT GKLPDIGEIT RPIVDD