| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_3478 |
|---|
| Symbol | |
|---|
| ID | 4280374 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella frigidimarina NCIMB 400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008345 |
|---|
| Strand | + |
|---|
| Start bp | 4138774 |
|---|
| End bp | 4140399 |
|---|
| Gene Length | 1626 bp |
|---|
| Protein Length | 541 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 638136293 |
|---|
| Product | sulfatase |
|---|
| Protein accession | YP_752147 |
|---|
| Protein GI | 114564633 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2194] Predicted membrane-associated, metal-dependent hydrolase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGATTTCTA GATTTAAGAC GTTATCGGTT AACCAATTCA CTTTCATCAC TGCGTTGTTT
TATGTTGCCA TTTTCAATCT ACCGCTCTTT GGTATAGTGC GAAAAGGAAT TGAAAAACAA
CCAGAAGTTG ATCCCCTTTT CATCGCATCT ATGCCGCTAT TTTTAACATT TGCGCTGAGT
TTTTTGTTTT CAATTTTTAC CGTCAAATAC CTGCTGAAGC CCTTTTTTAT CGTATTGACG
TTACTTTCCT CAAGTGTATT TTTTGCAGCC TATCAATACA ATGTCGTGTT TGACTACGGC
ATGATAGAAA ACACGTTTCA AACACATCCT GCTGAAGCAT TGATGTATGT AAATCTTGCA
TCAATTACCA ATCTACTGCT GACTGGGCTA TTACCGTCAT ATCTTATTTA TAAGGCCGAT
ATTCATTATC AGCCCTTTTT TAAGGAGTTA TTGCATAAAT TAGCCTTTAT GCTGCTAATG
TTCGTTGGCA TTGGGATAGT CGCCTTTTTT TACTATCAAG ATTATGCTGC ATTTGGTCGA
AACAACAGTG AGTTAAGGCG TTACATTGTC CCTACCTATT TTGTCAGTAG TGCATCTAAA
TATCTCAATG AGCACTATTT GCAGACGCCC ATGGAATACC AACAACTTGG CCTAGATGCG
AAGAATGCCA GTCGTAACCC GAACACTAAA CCTAACTTAT TAGTGTTTGT TGTGGGTGAA
ACTGCGCGCT CAATGAGCTA TCAATATTAT GGATATAACA AGCCAACCAA TGCTCATACC
CAAAATCAGG GGCTGATTGC GTTTAACGAT ACTAGCTCAT GCGGCACGGC CACGGCGGTG
TCTCTACCCT GTATGTTTTC ACGAATGGGG CGGGCAGACT ATGATCCTCG CCGTGCTAAT
GCTCAAGACA CAGTGATTGA TGTGTTAAGT CATAGTGGTA TAAAAGTACA GTGGTTTGAT
AATGATTCTG GCTGTAAAGG TGTGTGTGAT CAGGTTGAAA ATCTCACGAT AGATTTGAAG
AGTGATCCGA AGCTGTGTTC TGGCCAATAT TGTTTTGACC AAGTATTGCT CAACAAATTA
GATAAAATTC TGGCAGTAGC ACCAAGTCAA GATACAGTAA TTTTTTTGCA TATCATTGGT
AGTCATGGAC CAACTTATTA TCTTAGATAC CCGCCAGAGC ATCGTAAATT TATACCGGAT
TGTCCGCGCA GTGATATTCA AAATTGCAGT CAAGAAGAAC TGATTAACAC CTACGACAAC
ACTATTCTAT ATACGGATTT TATTCTCAGT GAAGTGGTGA ATAAATTAAA AGGTAAGCAG
GATATGTTCG ATACTGCAAT GCTGTATCTC TCTGACCATG GTGAGTCTTT GGGTGAAAAG
GGCATGTATT TACATGGTGC GCCCTATAGT ATTGCACCGA AAGAACAAAC TAGCGTACCA
ATGCTGGCTT GGGTATCTAA TGACTTTAGC CAAGATAATC AGTTGAACAT GACTTGTGTT
GCACAGCGAG CAGAACAGGG CGGCTTTTCC CACGACAATT TGTTCGACAG TTTGCTAGGA
CTTATGAATG TAAAAACCAC CGTCTATCAG AGCCAACTCG ATATTTTTGC ACCTTGCAGG
TATTAG
|
|---|
| Protein sequence | MISRFKTLSV NQFTFITALF YVAIFNLPLF GIVRKGIEKQ PEVDPLFIAS MPLFLTFALS
FLFSIFTVKY LLKPFFIVLT LLSSSVFFAA YQYNVVFDYG MIENTFQTHP AEALMYVNLA
SITNLLLTGL LPSYLIYKAD IHYQPFFKEL LHKLAFMLLM FVGIGIVAFF YYQDYAAFGR
NNSELRRYIV PTYFVSSASK YLNEHYLQTP MEYQQLGLDA KNASRNPNTK PNLLVFVVGE
TARSMSYQYY GYNKPTNAHT QNQGLIAFND TSSCGTATAV SLPCMFSRMG RADYDPRRAN
AQDTVIDVLS HSGIKVQWFD NDSGCKGVCD QVENLTIDLK SDPKLCSGQY CFDQVLLNKL
DKILAVAPSQ DTVIFLHIIG SHGPTYYLRY PPEHRKFIPD CPRSDIQNCS QEELINTYDN
TILYTDFILS EVVNKLKGKQ DMFDTAMLYL SDHGESLGEK GMYLHGAPYS IAPKEQTSVP
MLAWVSNDFS QDNQLNMTCV AQRAEQGGFS HDNLFDSLLG LMNVKTTVYQ SQLDIFAPCR
Y
|
|---|
| |