Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_3476 |
Symbol | |
ID | 4281123 |
Type | |
Is gene spliced | No |
Is pseudo gene | Yes |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | + |
Start bp | 4134981 |
End bp | 4137958 |
Gene Length | 2978 bp |
Protein Length | |
Translation table | |
GC content | 63% |
IMG OID | 639331097 |
Product | |
Protein accession | |
Protein GI | |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4644] Transposase and inactivated derivatives, TnpA family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCCCGCC GTTCAATCCT CTCCGCCGCA GAGCGCGACA GTCTCTTGGC GTTGCCCGAT ACCCAAGACG AACTCATCCG GCTCTACACG TTCAGCGAAC CCGACCTGTC ACTAATCCGC CAGCGGCGCG GTGACGCCAA CCGCCTGGGT GTCGCGGTGC AATTATGCTT ATTGCGCTTT CCCGGTCAGG GCCTGCTGCC CGACGCTGCG GTGCCGATGC CCCTGCTGCA ATGGATCGGA CGGCAACTGC GCATCGATCC ATCGTGCTGG CCACAGTATG CAGAGAGGGA AGAAACCCGG CGCGAGCATC TGCTTGAGCT GCGTGCATAT TTGGGCATGG AGCCGTTCGG CCTGGCGCAC TATCGGCAGG CTGTCCATGC CGCGACCGAG TTGGCCTTGC AAACCGACAA GGGCATCATG CTGGCCAACA GTGTTCTCGA CGACCTGCGG CACCGACACG TCATCTTGCC GACGCTGGAT GTTGTCGAGC GCGTCTGTGC CGAGGCGATC ACCCGCGCCA ACCGGCAAAT CTACGAAACC TTGTCCGAAC CGCTATCGGA CGCGCATCGT CGCCGCCTTG ACGATCTGCT CAAACGCCGG GACAACGGCA AAACGACCTG GCTGGCCTGG CTGCGCCAGT CACCCGTCAA GCCCAATTCG CGGCACATGC TCGAACACAT CGAACGCCTC AAGGCATGGC AGGCGCTCGA CCTGCCTTCC GGCGTCGAGC GGTCGGTGCA CCAGAATCGC CTGCTCAAGA TCGCCCGCGA GGGTGGCCAG ATGACACCCG CCGACCTGGC CAAGTTCGAG GCGCAGCGGC GCTACGCCAC CCTGGTCGCG CTCGCCATCG AGGGTATGCA GGTATGGCCA CCGTCACCGA TGAAATCATC GACCTGCATG ATCGAATCCT GGGCAAGCTG TTCAACGCCG CCAAGAACAA GCATCAGCAG CAGTTCCAGG CATCCGGCAA GGCGATCAAC GCCAAGGTGC GGCTGTTTGG GCGCATCGGT CAGGCGCTGA TCGAGGCCAA GCAAGCGGGC CGCGATCCGT TCGCCGCAAT CGAGGGCGTA CTATCCTGGG ATGCTTTCGC CGAAAATGTC ACCGAAGCGC AGAAGCTCGC GCAGCCCGAG GACTTCGATT TCCTGCACCG CATCGGCGAG AGCTACGCCA CGTTACGCCG GTACGCGCCG GAATTCCTCG CCGTGCTCAA GCTGCGGGCT GCGCCCGCTG CCAAGGATGT GCTGGACGCC ATCGAGGTGC TGCGCGGCAT GAACAGCGAC AACGCACGCA AGGTGCCTGC CGATGCGCCG ACCGACTTCA TCAAGCCGCG CTGGCAGAAG CTGGTGATGA CCGATGCCGG CATCGACCGG CGCTACTACG AGTTGTGCGC ACTGTCGGAA CTGAAGAACG CGCTGCGCTC CGGCGACATC TGGGTGCAAG GCTCACGCCA GTTCAAGGAT TTCGAGGACT ACCTGGTACC GCCTGTGAAA TTCGCCAGCC TCAAGCTGGC CAGCGAACTG CCGCTGGCTG TGGTCACCAA CTGCGACCAG TACCTGCATG ACCGGCTGAC GCTGCTAGAA ACACAGCTTG CGACCGTCAA CCGCATGGCG GCGGCCAACG ACCTGCCGGA CGCCATCATC ACCGAGTCTG GCCTGAAGAT CACGCCTCTG GATGCGGCGG TGCCTGACAC CGCGCAGGCG CTGATCGACC AGACCGCGAT GATCCTGCCG CACATCAAGA TCACCGAACT GCTTATGGAA GTGGATGAAT GGACGGGCTT CACCCGCCAC TTTACGCACC TGAAATCGGG CGACCTGGCC AAGGACAAGA ACCTGCTGCT GACCACCATA CTGGCCGACG CGATCAATCT CGGCCTGACC AAGATGGCCG AGTCCTGTCC CGGCACAACG TATGCCAAGC TCGCCTGGCT ACAAGCCTGG CATACCCGCG ATGAAACCTA TTCGACGGCG CTGGCCGAAT TGGTGAACGC GCAGTTCCGG CATCCCTTCG CCGAGCATTG GGGTGACGGC ACCACGTCAT CGTCGGACGG CCAGAACTTC CGCACCGGCA GCAAGGCCGA GAGCACCGGG CACATCAACC CGAAATATGG CAGCAGCCCA GGGCGGACGT TTTACACGCA CATCTCCGAC CAGTACGCGC CGTTCCACAC CAAGGTCGTG AACGTCGGCG TGCGCGACTC GACCTACGTG CTCGACGGCC TGCTGTACCA CGAGTCCGAC CTGCGCATCG AGGAGCACTA CACCGACACG GCGGGCTTCA CCGATCATGT CTTTGCCCTC ATGCATCTGC TGGGCTTCCG CTTCGCGCCG CGCATCCGCG CCCTGGGCGA CACCAAGCTG TTCATCCCTA AGGGTGAAGC CAGTTACGAC GCACTCAGAC CGACGATTAG CAGCGACAAG TTGAACATCA AGGCTATTCG TGCCCATTGG GATGAAATCC TGCGCCTGGC TACCTCGATC AAACAGGGCA CGGTGACGGC CTCGCTGATG TTGCGCAAGC TCGGCAGCTA CCCGCGCCAG AACGGCCTGG CCGTTGCGCT GCGCGAGCTG GGGCGCATCG AGCGCACGCT GTTCATCTTG GACTGGCTGC AAAGCGTGGA ACTACGCCGT CGTGTGCATG CCGGATTGAA CAAGGGCGAA GCCCGCAATG CGCTGGCCAG GGCGGTGTTC TTCAACCGGC TGGGCGAAAT CCGCGACCGC AGTTTCGAGC AGCAGCGCTA CCGGGCCAGT GGCCTCAACC TGGTGACGGC GGCCATCGTG CTGTGGAACA CGGTCTACCT GGAGCGCGCC GCGAATGCTT TGCGCGGCCA CGGCCATGGT GTCGATGAAG GGCTGTTGCA GTACCTGTCG CCGCTGGGTT GGGAGCATAT CAACCTGACC GGCGATTACC TCTGGCGCAG TAGCTCCAAA GTAGGCGTGG GGAAATTCCG ACCGCTACGT CCGCTCTCTG GGTCTTAG
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Protein sequence | |
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