Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_3473 |
Symbol | |
ID | 4280370 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | - |
Start bp | 4132936 |
End bp | 4133895 |
Gene Length | 960 bp |
Protein Length | 319 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 638136289 |
Product | cation diffusion facilitator family transporter |
Protein accession | YP_752143 |
Protein GI | 114564629 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1230] Co/Zn/Cd efflux system component |
TIGRFAM ID | [TIGR01297] cation diffusion facilitator family transporter |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCACCG GTCACACCCA TGCCCTACCC AGCGAGCGCA ATGAAAAATC GCTCTGGATC GCCCTGGCGC TGACCGGGAG CTTCTTGCTG GCCGAAGTCG CCGCAGGCAT CGTTTTCAAC AGCCTGGCCC TGCTCTCAGA TGCGGCGCAC ATGTTCACGG ATGCAGCGGC GCTGGCCATC GCCTTGGCGG CTGTACGGGT GGCGAGACGG CCAGCCGATG CCAAGCGCAC CTATGGCTAC TACCGCTTCG AAATCCTTGC GGCCGCATTC AACGCCCTGT TGCTCTTCGG CGTCGCTGGC TACATCCTGT ATGAGGGCTG GCAGCGTTTG CGCGAGCCAG CGCAGGTTCA GTCCAGCGGG ATGCTGGTGG TAGCAGTGCT GGGTCTGATC GTCAACCTCA TCAGCATGCG TATGCTTCAG GGCGGCAAGG ACAAGAGCCT CAACGTCAAA GGCGCTTATC TGGAGGTCTG GAGCGACATG ATTGGCTCCA TCGGCGTGAT CGGAGCTGCG CTGGTCATCC GATTCACCGG CTGGGTGTGG GTAGATGCGG TCGTCGCCGT GGCAATCGGG CTATGGGTGC TGCCACGAAC TTGGCTGCTA CTCAAGGAAA GCCTGAATGT CTTGCTGGAG GGAGTCCCAG ACGGCATTGA CATGGGAGCC TTGATGGCAT CTGTTCAGGC CGTGCCAGGC GTGACAGGGC TGCATGACTT GCACGTATGG GCGCTCACGA GCGGCAAGGT CAGCATGACC GCTCATATCG TGTATGCGCC GGAAATAGGG CCCGACGAGT TGCTCAAAAC CCTCAAGTTG TTGCTGGCTG ACCGATTCAG CATCTTCCAT ACGACGCTGC AACTGGAGAT TGTTGCCTGT GAACACAGCG TCGATGGGTG CAACTTCGTG GATCATCGCC ACAAAGAACC GAGTTCTCAA CCAGACCAAG CCGCAGCCCG GCAGGCGTGA
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Protein sequence | MSTGHTHALP SERNEKSLWI ALALTGSFLL AEVAAGIVFN SLALLSDAAH MFTDAAALAI ALAAVRVARR PADAKRTYGY YRFEILAAAF NALLLFGVAG YILYEGWQRL REPAQVQSSG MLVVAVLGLI VNLISMRMLQ GGKDKSLNVK GAYLEVWSDM IGSIGVIGAA LVIRFTGWVW VDAVVAVAIG LWVLPRTWLL LKESLNVLLE GVPDGIDMGA LMASVQAVPG VTGLHDLHVW ALTSGKVSMT AHIVYAPEIG PDELLKTLKL LLADRFSIFH TTLQLEIVAC EHSVDGCNFV DHRHKEPSSQ PDQAAARQA
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