Gene Sfri_3473 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_3473 
Symbol 
ID4280370 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand
Start bp4132936 
End bp4133895 
Gene Length960 bp 
Protein Length319 aa 
Translation table11 
GC content60% 
IMG OID638136289 
Productcation diffusion facilitator family transporter 
Protein accessionYP_752143 
Protein GI114564629 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1230] Co/Zn/Cd efflux system component 
TIGRFAM ID[TIGR01297] cation diffusion facilitator family transporter 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCACCG GTCACACCCA TGCCCTACCC AGCGAGCGCA ATGAAAAATC GCTCTGGATC 
GCCCTGGCGC TGACCGGGAG CTTCTTGCTG GCCGAAGTCG CCGCAGGCAT CGTTTTCAAC
AGCCTGGCCC TGCTCTCAGA TGCGGCGCAC ATGTTCACGG ATGCAGCGGC GCTGGCCATC
GCCTTGGCGG CTGTACGGGT GGCGAGACGG CCAGCCGATG CCAAGCGCAC CTATGGCTAC
TACCGCTTCG AAATCCTTGC GGCCGCATTC AACGCCCTGT TGCTCTTCGG CGTCGCTGGC
TACATCCTGT ATGAGGGCTG GCAGCGTTTG CGCGAGCCAG CGCAGGTTCA GTCCAGCGGG
ATGCTGGTGG TAGCAGTGCT GGGTCTGATC GTCAACCTCA TCAGCATGCG TATGCTTCAG
GGCGGCAAGG ACAAGAGCCT CAACGTCAAA GGCGCTTATC TGGAGGTCTG GAGCGACATG
ATTGGCTCCA TCGGCGTGAT CGGAGCTGCG CTGGTCATCC GATTCACCGG CTGGGTGTGG
GTAGATGCGG TCGTCGCCGT GGCAATCGGG CTATGGGTGC TGCCACGAAC TTGGCTGCTA
CTCAAGGAAA GCCTGAATGT CTTGCTGGAG GGAGTCCCAG ACGGCATTGA CATGGGAGCC
TTGATGGCAT CTGTTCAGGC CGTGCCAGGC GTGACAGGGC TGCATGACTT GCACGTATGG
GCGCTCACGA GCGGCAAGGT CAGCATGACC GCTCATATCG TGTATGCGCC GGAAATAGGG
CCCGACGAGT TGCTCAAAAC CCTCAAGTTG TTGCTGGCTG ACCGATTCAG CATCTTCCAT
ACGACGCTGC AACTGGAGAT TGTTGCCTGT GAACACAGCG TCGATGGGTG CAACTTCGTG
GATCATCGCC ACAAAGAACC GAGTTCTCAA CCAGACCAAG CCGCAGCCCG GCAGGCGTGA
 
Protein sequence
MSTGHTHALP SERNEKSLWI ALALTGSFLL AEVAAGIVFN SLALLSDAAH MFTDAAALAI 
ALAAVRVARR PADAKRTYGY YRFEILAAAF NALLLFGVAG YILYEGWQRL REPAQVQSSG
MLVVAVLGLI VNLISMRMLQ GGKDKSLNVK GAYLEVWSDM IGSIGVIGAA LVIRFTGWVW
VDAVVAVAIG LWVLPRTWLL LKESLNVLLE GVPDGIDMGA LMASVQAVPG VTGLHDLHVW
ALTSGKVSMT AHIVYAPEIG PDELLKTLKL LLADRFSIFH TTLQLEIVAC EHSVDGCNFV
DHRHKEPSSQ PDQAAARQA