Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_3465 |
Symbol | |
ID | 4280362 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | + |
Start bp | 4120241 |
End bp | 4121821 |
Gene Length | 1581 bp |
Protein Length | 526 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 638136281 |
Product | transposase Tn3 family protein |
Protein accession | YP_752135 |
Protein GI | 114564621 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4644] Transposase and inactivated derivatives, TnpA family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCGCGCC GCTCAATCCT GTCCGCCACC GAGCGCGAAA GCCTGCTGGC ACTACCAGAT GCCAAAGACG AACTGATACG GCACTACACG TTCAACGAAA CCGACCTATC GGTGATCCGC CAGCGTCGCG GCGCTGCGAA TCGATTGGGC TTCGCCGTGC AGCTTTGCTA CTTGCGATTC CCTGGCATCT TCTTGGGCAT CGATGAGCCT CCGTTTCCGC CCCTGCTGCG CATGGTGGCC GCACAACTCA AGGTGCCGGT GGAAAGCTGG AACGATTACG GCCAGCGCGA GCAGACACGG CGGGAGCACT TGGTCGAGCT GCAAACGGTG TTTGGATTCA AGCCCTTCAC CATGAGTCAC TACCGGCAAG CCGTGCATAC ATTGACCGAA CTGGCCTTGC AAACAGACAA AGGCATTGTG CTGGCCAGCA CCCTTGTTGA AAACCTGCGG CGGCAGAGCA TCATCCTACC CGCCATGAAT GCCATCGAGC GCGCAAGCGC CGAGGCCATT ACCCGTGCCA ACCGGAGCAT CCATGCGGCA TTGGCCGATT CCTTGATACC TGTCCATCGC CAGCGCCTGG ACGAACTGCT CAAGCGCAAG GATGGTAGCA AAATGACGTG GCTAGCGTGG CTGCGCCAAT CGCCCGCCAA GCCTAACTCG CGCCACATGC TTGAACACAT CGAACGCCTC AAAGCCTGGC AAGCGCTTGA CCTACCTGCT GGCATCGAAC GGCAGGTACA CCAAAACCGC TTGCTCAAGA TCGCCCGCGA GGGCGGCCAG ATGACGCCCG CCGACCTGGC CAAGTTCGAG TCGCAGCGGC GTTACGCCAC CTTGGTAGCA CTGGCCATCG AAGGCATGGC CACCGTCACT GATGAAATCA TCGACCTTCA CGACCGCATC ATCGGCAAGC TGTTCAATGC GGCCAAGAAC AAGCATCAAC AGCAGTTCCA GGCTTCCGGC AAGGCGATCA ACGACAAGGT GCGGATGTAT GGGCGCATCG GTCAGGCGCT GATTGAAGCC AAACAAAACG GCGGCGATCC GTTCGCCGCC ATCGAAGCGG TCATGCCGTG GGACACCTTC GCCGCCAGCG TCACCGAGGC GCAAACGCTG GCGCGGCCTG CAGATTTTGA TTTCCTGCAC CATATCGGCG AGAGTTACGC CACGCTGCGC CGCTATGCGC CGCAGTTCCT GGACGTGCTC AAACTGCGCG CCGCGCCCAC CGCCAAGGGT GTGCTCGATG CCATCGACGT GCTGCGCGGC ATGAACAGCG ACAGCGCGCG CAAGGTGCCC GCCGATGCGC CAACCGCATT CATCAAGCCG CGCTGGGCAA AGCTGGTTCT GACCGACGAG GGTATTGACC GGCGTTACTA CGAATTATGC GCCCTATCGG AGCTGAAGAA CGCACTGCGC TCTGGTGATG TTTGGGTGCA GGGTTCGCGT CAGTTCAAGG ACTTCGACGA ATACCTGGTG CCGATCGAGA AGTTCGCCAC CTTGAAGCTG GCCAGCGAAT TGCCACTGGC CGTGGCCACC GACTGCGACC AATATGGGGT TCTGGGGATT TCCCCCTCTA AAAAGACATA A
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Protein sequence | MPRRSILSAT ERESLLALPD AKDELIRHYT FNETDLSVIR QRRGAANRLG FAVQLCYLRF PGIFLGIDEP PFPPLLRMVA AQLKVPVESW NDYGQREQTR REHLVELQTV FGFKPFTMSH YRQAVHTLTE LALQTDKGIV LASTLVENLR RQSIILPAMN AIERASAEAI TRANRSIHAA LADSLIPVHR QRLDELLKRK DGSKMTWLAW LRQSPAKPNS RHMLEHIERL KAWQALDLPA GIERQVHQNR LLKIAREGGQ MTPADLAKFE SQRRYATLVA LAIEGMATVT DEIIDLHDRI IGKLFNAAKN KHQQQFQASG KAINDKVRMY GRIGQALIEA KQNGGDPFAA IEAVMPWDTF AASVTEAQTL ARPADFDFLH HIGESYATLR RYAPQFLDVL KLRAAPTAKG VLDAIDVLRG MNSDSARKVP ADAPTAFIKP RWAKLVLTDE GIDRRYYELC ALSELKNALR SGDVWVQGSR QFKDFDEYLV PIEKFATLKL ASELPLAVAT DCDQYGVLGI SPSKKT
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