Gene Sfri_3465 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_3465 
Symbol 
ID4280362 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand
Start bp4120241 
End bp4121821 
Gene Length1581 bp 
Protein Length526 aa 
Translation table11 
GC content60% 
IMG OID638136281 
Producttransposase Tn3 family protein 
Protein accessionYP_752135 
Protein GI114564621 
COG category[L] Replication, recombination and repair 
COG ID[COG4644] Transposase and inactivated derivatives, TnpA family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGCGCC GCTCAATCCT GTCCGCCACC GAGCGCGAAA GCCTGCTGGC ACTACCAGAT 
GCCAAAGACG AACTGATACG GCACTACACG TTCAACGAAA CCGACCTATC GGTGATCCGC
CAGCGTCGCG GCGCTGCGAA TCGATTGGGC TTCGCCGTGC AGCTTTGCTA CTTGCGATTC
CCTGGCATCT TCTTGGGCAT CGATGAGCCT CCGTTTCCGC CCCTGCTGCG CATGGTGGCC
GCACAACTCA AGGTGCCGGT GGAAAGCTGG AACGATTACG GCCAGCGCGA GCAGACACGG
CGGGAGCACT TGGTCGAGCT GCAAACGGTG TTTGGATTCA AGCCCTTCAC CATGAGTCAC
TACCGGCAAG CCGTGCATAC ATTGACCGAA CTGGCCTTGC AAACAGACAA AGGCATTGTG
CTGGCCAGCA CCCTTGTTGA AAACCTGCGG CGGCAGAGCA TCATCCTACC CGCCATGAAT
GCCATCGAGC GCGCAAGCGC CGAGGCCATT ACCCGTGCCA ACCGGAGCAT CCATGCGGCA
TTGGCCGATT CCTTGATACC TGTCCATCGC CAGCGCCTGG ACGAACTGCT CAAGCGCAAG
GATGGTAGCA AAATGACGTG GCTAGCGTGG CTGCGCCAAT CGCCCGCCAA GCCTAACTCG
CGCCACATGC TTGAACACAT CGAACGCCTC AAAGCCTGGC AAGCGCTTGA CCTACCTGCT
GGCATCGAAC GGCAGGTACA CCAAAACCGC TTGCTCAAGA TCGCCCGCGA GGGCGGCCAG
ATGACGCCCG CCGACCTGGC CAAGTTCGAG TCGCAGCGGC GTTACGCCAC CTTGGTAGCA
CTGGCCATCG AAGGCATGGC CACCGTCACT GATGAAATCA TCGACCTTCA CGACCGCATC
ATCGGCAAGC TGTTCAATGC GGCCAAGAAC AAGCATCAAC AGCAGTTCCA GGCTTCCGGC
AAGGCGATCA ACGACAAGGT GCGGATGTAT GGGCGCATCG GTCAGGCGCT GATTGAAGCC
AAACAAAACG GCGGCGATCC GTTCGCCGCC ATCGAAGCGG TCATGCCGTG GGACACCTTC
GCCGCCAGCG TCACCGAGGC GCAAACGCTG GCGCGGCCTG CAGATTTTGA TTTCCTGCAC
CATATCGGCG AGAGTTACGC CACGCTGCGC CGCTATGCGC CGCAGTTCCT GGACGTGCTC
AAACTGCGCG CCGCGCCCAC CGCCAAGGGT GTGCTCGATG CCATCGACGT GCTGCGCGGC
ATGAACAGCG ACAGCGCGCG CAAGGTGCCC GCCGATGCGC CAACCGCATT CATCAAGCCG
CGCTGGGCAA AGCTGGTTCT GACCGACGAG GGTATTGACC GGCGTTACTA CGAATTATGC
GCCCTATCGG AGCTGAAGAA CGCACTGCGC TCTGGTGATG TTTGGGTGCA GGGTTCGCGT
CAGTTCAAGG ACTTCGACGA ATACCTGGTG CCGATCGAGA AGTTCGCCAC CTTGAAGCTG
GCCAGCGAAT TGCCACTGGC CGTGGCCACC GACTGCGACC AATATGGGGT TCTGGGGATT
TCCCCCTCTA AAAAGACATA A
 
Protein sequence
MPRRSILSAT ERESLLALPD AKDELIRHYT FNETDLSVIR QRRGAANRLG FAVQLCYLRF 
PGIFLGIDEP PFPPLLRMVA AQLKVPVESW NDYGQREQTR REHLVELQTV FGFKPFTMSH
YRQAVHTLTE LALQTDKGIV LASTLVENLR RQSIILPAMN AIERASAEAI TRANRSIHAA
LADSLIPVHR QRLDELLKRK DGSKMTWLAW LRQSPAKPNS RHMLEHIERL KAWQALDLPA
GIERQVHQNR LLKIAREGGQ MTPADLAKFE SQRRYATLVA LAIEGMATVT DEIIDLHDRI
IGKLFNAAKN KHQQQFQASG KAINDKVRMY GRIGQALIEA KQNGGDPFAA IEAVMPWDTF
AASVTEAQTL ARPADFDFLH HIGESYATLR RYAPQFLDVL KLRAAPTAKG VLDAIDVLRG
MNSDSARKVP ADAPTAFIKP RWAKLVLTDE GIDRRYYELC ALSELKNALR SGDVWVQGSR
QFKDFDEYLV PIEKFATLKL ASELPLAVAT DCDQYGVLGI SPSKKT