| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_3462 |
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| Symbol | |
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| ID | 4280359 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 4116070 |
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| End bp | 4118475 |
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| Gene Length | 2406 bp |
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| Protein Length | 801 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 638136278 |
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| Product | heavy metal translocating P-type ATPase |
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| Protein accession | YP_752132 |
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| Protein GI | 114564618 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG2217] Cation transport ATPase |
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| TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01512] heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase
[TIGR01525] heavy metal translocating P-type ATPase |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGAAT GCGCTTCAAA GGGGTGTGGC TGCACGACTG AGCCGATCAT CCAACCCACG
GCACCGGCCC CGCTGGCAAC CGGATCGGCT CAAGCGGTGT ACCGCATCGA GAACATGGAT
TGCCCGACCG AAGAGGCGCT GATCCGAAGC AAACTGGCCG GTCTGGCGGG GGTGGCGGGT
CTTGAATTCA ACCTGATGCA ACGTACCTTG GCCGTGCGAC ACGAATTGCC TTCGTTGTCT
CCCGTCGAGC AGGCGCTGAA GGCCATCGGC ATGCAAGCTG TGCGCATGGA TCAGGCGTCG
GCCGAGCAGA CGACCAAGCT GTCCATTGCC AAGATGGATT GCCCGACCGA AGAGACGTTG
ATCCGCAACA AGCTCGGCAC CGTGGCCGGT GTTGCTGATC TCGATTTCAA CCTGATGCAG
CGCACGCTGT CGGTACGCCA TGCGAACCAG GTTCTGCCAG ACGTGCTCGT GGCACTGCAA
GCGCTTGGAT TCGAGGCGCA GGTCGTGGAC ACGGCAGAGG TCGCATCTCC ATCCGCCGCC
CCTGTGACCA CGCCGACCAA CTGGTGGCCG CTGGGCATCT CCTTGGTCAC TGCATCGGCG
GCCGAGGCGG TCTACTGGCT CCACAACGGC AATCACTGGT CGGTTGTCGT TCTGGCGCTT
GTCGCGGTCT TCACGGGTGG CCTCTCCACC TACAAGAAGG GGTGGATTGC GCTCAAGAAC
CGTAATCTCA ACATGAACGC CCTCATGTCG ATTGCGGTCA CGGGTGCCAT GTTGATCGGC
CACTGGCCCG AAGCGGCAAT GGTGATGGTA CTGTTCGCGC TGGCCGAGGT AATCGAAGCC
AAATCGCTGG ATCGCGCTCG TAACGCTATC CGTGGCCTGC TCGACCTGAC CCCGGAACAG
GCCACGGTAC AGCAGGCTGA CGGCACATGG CGCGAGGTGG GCGCCAAGCA AATCACCATC
GGCGCCCGCG TCCGGGTCAA ACCAGGTGAG CGCATCGCCC TTGATGGTGA GGTGCTGGAA
GGCCGCTCTG CCGTCAACCA AGCCCCGATC ACGGGTGAAA GCCTCCCGGT CGAAAAATCC
CCCGGTGATT CGGTGTTCGC TGGCACGATC AACGAATCCG GCTCGTTCGA GTACCGCGTC
ACCGCCTTGG CCAACAACTC CACTTTGGCC CGGATCATTC ACGCGGTAGA GGCTGCGCAA
GGTAGTCGTG CGCCGACTCA GCGTTTTGTC GATCAGTTCG CCCGCTGGTA CACCCCCGTT
GTATTCGGCG TTGCCATCGC CGTCGCGTTG TTGCCGCCGC TGTTCATGGG TGCGGCATGG
CTCGACTGGA TCTACCGTGC ATTGGTTCTG CTGGTGGTCG CCTGCCCGTG CGCACTGGTG
ATCTCTACAC CGGTCAGCAT CGTCAGCGGC CTGGCCGCCG CCGCCCGCCA CGGCATTCTC
ATCAAAGGTG GCGTCTATCT GGAAGAAGGC CGCAAGCTGC GCTGGCTGGC TCTGGACAAG
ACCGGCACGA TCACGCACGG CAAGCCCGCA CAGACCGACT TTGTCACATG GGGCAATGCA
CTCGCCTCGG ACAGCCGCAG CATCGCTGCC AGTCTGGCGG CCCGCTCGGA CCATCCTGTA
TCCAAGGCGG TGGCACAGGC CGCGCAGACG GACGGGGTTG CCTTGCTCGA CGTGGCCGAA
TTCAACGCGC TGCCCGGTCG GGGTGTGCAG GGCCAAATCA ACGGTGAAAC CTACCATCTT
GGCAACCAGC GGATGCTAGA AGAGCTGGGG CAGCGTACTC CCGAGCTGGA ACAGCGCATC
GCGGCGCTGG AAACCATGGG TAAAACTGTC GTGATGTTGG TCAGCGCAAA AGGGGTTCAT
GCCTTATTTG CCGTAGCGGA CACCATCAAG GAAAGCAGCA GGAGCGCCAT TGCCGAGCTT
CATGCACTGG GCATCAACAC CATGATGCTG ACCGGCGACA ACCCCCACAC GGCACAGGCC
ATTGCCGCAC AAGCCGGGAT CGACCGTGCG CAAGGCAATC TGCTCCCAGA CGACAAACTG
CGCGAAGTTG AGCTACTGGC CATAAAGGGC AAGGTCGGCA TGGTCGGTGA TGGCATCAAC
GATGCCCCGG CCTTGGCGCG TGCGGACATC GGCTTTGCCA TGGGAGCGGC TGGCACAGAT
ACCGCCATCG AGACCGCTGA CGTGGCCCTG ATGGACGACA ACCTGGGCAA GATTCCGACC
TTCGTGCGCC TGTCGCGTGC GACGGCGCAG GTGCTGATGC AAAACATTGT GCTGGCCCTT
GGCATCAAGG CAGTATTTCT GGTGCTGACC TTCACGGGTC AAGCGACCAT GTGGATGGCG
GTGTTTGCTG ATATGGGGGC CAGCTTGCTC GTCGTTGGCA ATGGCTTGAG GCTGTTGCGC
AAATGA
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| Protein sequence | MSECASKGCG CTTEPIIQPT APAPLATGSA QAVYRIENMD CPTEEALIRS KLAGLAGVAG
LEFNLMQRTL AVRHELPSLS PVEQALKAIG MQAVRMDQAS AEQTTKLSIA KMDCPTEETL
IRNKLGTVAG VADLDFNLMQ RTLSVRHANQ VLPDVLVALQ ALGFEAQVVD TAEVASPSAA
PVTTPTNWWP LGISLVTASA AEAVYWLHNG NHWSVVVLAL VAVFTGGLST YKKGWIALKN
RNLNMNALMS IAVTGAMLIG HWPEAAMVMV LFALAEVIEA KSLDRARNAI RGLLDLTPEQ
ATVQQADGTW REVGAKQITI GARVRVKPGE RIALDGEVLE GRSAVNQAPI TGESLPVEKS
PGDSVFAGTI NESGSFEYRV TALANNSTLA RIIHAVEAAQ GSRAPTQRFV DQFARWYTPV
VFGVAIAVAL LPPLFMGAAW LDWIYRALVL LVVACPCALV ISTPVSIVSG LAAAARHGIL
IKGGVYLEEG RKLRWLALDK TGTITHGKPA QTDFVTWGNA LASDSRSIAA SLAARSDHPV
SKAVAQAAQT DGVALLDVAE FNALPGRGVQ GQINGETYHL GNQRMLEELG QRTPELEQRI
AALETMGKTV VMLVSAKGVH ALFAVADTIK ESSRSAIAEL HALGINTMML TGDNPHTAQA
IAAQAGIDRA QGNLLPDDKL REVELLAIKG KVGMVGDGIN DAPALARADI GFAMGAAGTD
TAIETADVAL MDDNLGKIPT FVRLSRATAQ VLMQNIVLAL GIKAVFLVLT FTGQATMWMA
VFADMGASLL VVGNGLRLLR K
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