Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_3443 |
Symbol | |
ID | 4280341 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | - |
Start bp | 4095716 |
End bp | 4097353 |
Gene Length | 1638 bp |
Protein Length | 545 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 638136260 |
Product | hypothetical protein |
Protein accession | YP_752114 |
Protein GI | 114564600 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAAGAC AACGAAAATA CCTCACCATC AACAAAGATA AGATCAGGAA AACTTCGGCA GTAGAGCTAA CCGTTGACGC CCCCCAAAGC CAAGGCTTAG TGCGAGCAAT ACACCCAGTT GTTACCTACC CAAATCTGGG TTCTAAAGGT GGCAATGGCG TAAACTTCGA CTTTACCTCT TATTACGGCA AAGGCTACGA CGACATCACG AATCGAGTTT ACTACACTGC AAAGGCGTTA CTGAGAAACA CTAATGCTTT TACTGAAGAA ACTCAGCACA CGTATTTAAA GAATGGCTTT CGCTATTTTG CACAATATCT TGAGTTATTC AGGCACTCAG TCAGGGGAGA TTTAACGCAA AATGACATTA CGCCTAGACT GATTGAACAA TATTTGCTGC ACCTCAAAGG TAGTGAGTTT AAACCTAGCT TTCAAAAAGC TCTCTACACG CACCTCAAGT CATTGTTAGT CCGTATGAAA GAAAAAGGCT ACTGGCCACT TGTCGATGAC ATCAACCTTA ATAGTGATTT TTTCCCCAAG AATCCTTTTC CAAACTCCGG TAAACATGCA AAAAGTGAAA GATCACTCTC TCCCTATGAG AAAAGACAGG TTGTTGTTGC GTTAAAGCAA GCGGTTAAAC CTATTTATCA AAAGAGAGAG TCATTGTCGG GTTACGAATT AACGTTGTGC CTACTTGCTG TGGCAATTCA AACGGGTATC AATACTTCAC CACTGCTTAA CATGACAACG GATGCTTTAA CTGATCATCC ACTTAAAGAT AATCGAAAGC TTTTAACTGT GTTTAAAAAG CGGGGTAATG CAAAACAATT ACATAACTTG CGCAAATCAG AAAACGTTGA GGTAGTACAA GGGGTAAAAC TAGATGTGGC TTACCTGATC GATACCATTA TTCAGCTAAG CTCGTCATTG AGGCAAGTGA GTGGTAGCAA TTTAGTATTC TTATATGTCG CTAGCAACAG TAAAAGCGCT ATTACCTCTC TGTCAGACTT ATCGCTGCAC TTCAACATAA AAAAATTCAT CAAAGAAAAC GACCTAAAGG ATGAAGATGG ACGCACAATT AAGCTTAATA TCAGTCGTAT TCGCAAAACT TTCATCAATG GCATGTACGA ACTGAGTGGT GAAAGTTTGT TGATTGCAGC ACAGCAAGCT AAACATAGTG GAACAAGTTC ACTTGACTAC TATTTGCAAG CCCCTGAGCA ATCAAAACGT AACCTAGGTT TGATGGGTGA AATACGAGTC AAAGAGCTAA CTTGCGATGC TCCAAGCGTT CCTGTCGGCC ATTGTAAAGA CCCGAAAAAT GGGGATAAAG CACCGAAAGA TGGAACGTTC TGTAATGACT TCTTAGGGTG TTTCCGTTGT AAGAGCTTCG TTATTACAGG CAATGATTTG TATAAGCTCT TTAGCTTCTA TTGGGCAATA ATTCGTAACC GTGATGAATT TGGTCGTAAA GACTGGAAGC GGCACCTAAA GAACGTGCTC AGAATTGTGG ATGAAGAGGT TGTGCCTGAG TTTGCCAAGC TTGGTCAATT GCAGCATGTC AATGCTGAAA AGGAACGAGC AAGAACCAAT CCACATCCAT ACTGGCAAAA TCTCGATATG TTAAAGGTGA CACAATGA
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Protein sequence | MARQRKYLTI NKDKIRKTSA VELTVDAPQS QGLVRAIHPV VTYPNLGSKG GNGVNFDFTS YYGKGYDDIT NRVYYTAKAL LRNTNAFTEE TQHTYLKNGF RYFAQYLELF RHSVRGDLTQ NDITPRLIEQ YLLHLKGSEF KPSFQKALYT HLKSLLVRMK EKGYWPLVDD INLNSDFFPK NPFPNSGKHA KSERSLSPYE KRQVVVALKQ AVKPIYQKRE SLSGYELTLC LLAVAIQTGI NTSPLLNMTT DALTDHPLKD NRKLLTVFKK RGNAKQLHNL RKSENVEVVQ GVKLDVAYLI DTIIQLSSSL RQVSGSNLVF LYVASNSKSA ITSLSDLSLH FNIKKFIKEN DLKDEDGRTI KLNISRIRKT FINGMYELSG ESLLIAAQQA KHSGTSSLDY YLQAPEQSKR NLGLMGEIRV KELTCDAPSV PVGHCKDPKN GDKAPKDGTF CNDFLGCFRC KSFVITGNDL YKLFSFYWAI IRNRDEFGRK DWKRHLKNVL RIVDEEVVPE FAKLGQLQHV NAEKERARTN PHPYWQNLDM LKVTQ
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