| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_3440 |
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| Symbol | |
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| ID | 4280338 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 4092056 |
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| End bp | 4092925 |
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| Gene Length | 870 bp |
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| Protein Length | 289 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638136257 |
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| Product | transcriptional regulator, LysR family protein |
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| Protein accession | YP_752111 |
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| Protein GI | 114564597 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.152771 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTAATT GGGAAGGCGT TAGCGAATTT GTCGCCGTTG CAGAGGCAGA GAGCTTTACT
AAGGCTGCAA AACGGCTTGG GATATCAACC GCGCAAGTCA GCAGGCAGGT TAGCGCATTA
GAAACCCGAA TGGCTACTAA GCTGTTTCAC CGCACCACAC GTAAAGTGTC GGTGAGCGAA
GTGGGCCGGA TCTATTATCA ACACTGCAGA CAAGTGCTCG ATGGATTAGA AGAGGCCGAG
CGCGCAATTA CCAATTTACA GAGTACACCG AGAGGGCTGT TAAAAATTAC CGCCCCAGTA
ACTTATGGTG AAAAAACGCT TGCGCCGCTG GTGAACGACT TTATCGCTAA ATACCCGGAG
CTTGAAGTAA AGATAAATCT AACGAATCAG AAGGTCGACT TAATCGATGA GGGGTATGAT
CTCGCCATTC GACTCGGACA GCTTGAAGAC TCGAGTATGA TGGCCAAAAG ACTGTGCTCC
AGAACTCAAT ATGTCTGCGC CTCCCCAGAT TATGTTTCAA CTTTTGGCAT ACCTCACTCA
CTGTCGGAGC TGGAACAACA TAACTGTCTG CTGGGAACAT TAGATTACTG GCGATTTCAG
GAAAATGGAA AGACGAGAAA TGTCAGGGTT AAGGGTAATC TGACCTGTAA CAGTGGCCAT
GCACTCGTTG ATGCCGCGAT AAAAGGCATA GGCATCATTC AGCTACCTGA CCACTATGTC
TTGCCTTTTT TAGAAGATGG ACAGCTTGTT CCACTACTGG AGCAAAACCG TCAACCTAAA
GAGGGGATCT GGGCACTTTA TCCACACAAC AGACACCTAT CACCTAAGGT GCGCATGCTA
CTCGATTACC TGAGTAAGGC TCTAAGCTAA
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| Protein sequence | MFNWEGVSEF VAVAEAESFT KAAKRLGIST AQVSRQVSAL ETRMATKLFH RTTRKVSVSE
VGRIYYQHCR QVLDGLEEAE RAITNLQSTP RGLLKITAPV TYGEKTLAPL VNDFIAKYPE
LEVKINLTNQ KVDLIDEGYD LAIRLGQLED SSMMAKRLCS RTQYVCASPD YVSTFGIPHS
LSELEQHNCL LGTLDYWRFQ ENGKTRNVRV KGNLTCNSGH ALVDAAIKGI GIIQLPDHYV
LPFLEDGQLV PLLEQNRQPK EGIWALYPHN RHLSPKVRML LDYLSKALS
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