Gene Sfri_3434 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_3434 
Symbol 
ID4280333 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand- 
Start bp4087449 
End bp4088123 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content43% 
IMG OID638136252 
ProductIstB ATP binding domain-containing protein 
Protein accessionYP_752106 
Protein GI114564592 
COG category[L] Replication, recombination and repair 
COG ID[COG1484] DNA replication protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAGTATAT ACGTTGAGCA AAGCTTTAAA GAACGGTTAA GTTTACTGCT TGATCATGAA 
ATAACTCAGC GAGATCAGCG TAAAATAGAC CGCCTAACGA GCCTTGCAAA ATTCAGAGTT 
GGCGGCACAC TTGGCCAACT AAACTATGGT GCAGCACGGC AACTTGATAA ACCGCAGATC 
CGTTCATTAG CACAAGGTGA ATGGCTTCGC CTTCACCAAA ATATCTTGAT CACCGGCGCA 
ACGGGTTACG GTAAAACGTA TTTAGCTTGC GCGCTTGGTC AAAACCACTG CCAACAAGGG 
AGCAGCGTTT ATTATTTTAG GCTCAAAGAT CTATTAGAAA AGATGTTCTT AGCACAAGCC 
GATGGCAGTT ATCGCAAACT GATCAACAAG CTTAGTAGTG CCAGTTTACT GATCTTAGAT 
GATTGGGGAT TAGAGCCATT AACGGCGCAG CAACGTAGCG ATTTACTGGA ATTAATTGAT 
GCAAGATACG ATACAAAATC GACCTTAATA GCGAGTCAGT TACCGATAGC CAATTGGTAT 
GAAATGATCG GAAAATCGAC GCATGCAGAT GCCATTTTAG ATCGGCCTGT TCACAGGGCA 
ATAAAGTTGG AATTAAAAGG CGAATCGATG CAAAAAAAAC TAAACACCTT GACTGAAGTC 
GATCACTCAA GCTAG
 
Protein sequence
MSIYVEQSFK ERLSLLLDHE ITQRDQRKID RLTSLAKFRV GGTLGQLNYG AARQLDKPQI 
RSLAQGEWLR LHQNILITGA TGYGKTYLAC ALGQNHCQQG SSVYYFRLKD LLEKMFLAQA 
DGSYRKLINK LSSASLLILD DWGLEPLTAQ QRSDLLELID ARYDTKSTLI ASQLPIANWY 
EMIGKSTHAD AILDRPVHRA IKLELKGESM QKKLNTLTEV DHSS