| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_3402 |
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| Symbol | |
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| ID | 4280304 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 4051361 |
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| End bp | 4052113 |
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| Gene Length | 753 bp |
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| Protein Length | 250 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 638136223 |
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| Product | hypothetical protein |
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| Protein accession | YP_752077 |
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| Protein GI | 114564563 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3248] Nucleoside-binding outer membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAAAAA TCTGCCTTTT AGCCACACTT GTACTCTCAC AAAATGTTTT TGCTGACGAT
ATAGTCCAAT GGTGGGATGT TAGCGCAACT GTCTTGCATG GCGAAAACTA TGACTTAGCA
CCATCAGAAA GACAAACTAC CATCACCTTA GAAACAGCCG GTGGTTGGAA GTATGGTGAT
TGGTTTGCAT TCCAGGATTT TATTAATTTC AATGGTAATA ATAACGGTGT TGATAGCACG
ACTTATGGCG AAATATCTCC GCGCTTTAGT GCTAGCAAAA TATTGGGCCA ACAAGTGAGC
TTTGGTGCGA TAAAAGATGT CTCTTTAGCG TTAACTTACG AAGAAGGCGA AGGCCCAGTT
AACAGCATGC TTTATGGTAT TGGTGTGGAC CTTGACGTGC CATTTTTTAG CTACTTACAA
CTGAACACTT ACCGTCGTGA TGCAATAAGC AGTGGTAATA TCAGTGATGG TTGGCAGTTT
ACGCCAGTAT TTAGAATCGA CATGCCAGTG GGCAATGCCA ATATTATTTT TGATGGTTTT
ATTGATTGGG TATTCTCTGC CGACAACAAC GGCTACGACG AAAACCTGCA CATCAATCCA
CAAATAAAGT ATGACTTAGG TAAAACATTG TTTGGTGATC ACAAACAAAA CAAACTGTTA
GTGGGTTTTG AATATGATTA CTGGCAAAGT AAATACGGTG TTGCGGGTAT CGACCAAAAT
ACCTATTCAA TTATTGCGCA GTATCATTTC TAA
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| Protein sequence | MKKICLLATL VLSQNVFADD IVQWWDVSAT VLHGENYDLA PSERQTTITL ETAGGWKYGD
WFAFQDFINF NGNNNGVDST TYGEISPRFS ASKILGQQVS FGAIKDVSLA LTYEEGEGPV
NSMLYGIGVD LDVPFFSYLQ LNTYRRDAIS SGNISDGWQF TPVFRIDMPV GNANIIFDGF
IDWVFSADNN GYDENLHINP QIKYDLGKTL FGDHKQNKLL VGFEYDYWQS KYGVAGIDQN
TYSIIAQYHF
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