| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_3397 |
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| Symbol | uvrD |
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| ID | 4280299 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 4044661 |
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| End bp | 4046844 |
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| Gene Length | 2184 bp |
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| Protein Length | 727 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638136218 |
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| Product | DNA-dependent helicase II |
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| Protein accession | YP_752072 |
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| Protein GI | 114564558 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0210] Superfamily I DNA and RNA helicases |
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| TIGRFAM ID | [TIGR01075] DNA helicase II |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACGTAT CATCATTATT AGACGGCCTA AACGATAAAC AGCGTGAGGC AGTCGGCGCG
CCACTTTCAA ATATGTTGGT GTTAGCGGGT GCCGGCAGTG GTAAAACCCG TGTATTAACC
CATCGTATTG CGTGGTTAAT GCAAGTTGAA CAACAAAGTC CATATTCTAT TTTGGCAGTC
ACCTTTACCA ACAAAGCCGC GGCAGAAATG CGTGAACGGG TGGAAAAGGT TGTGGGCACT
AACATGGGTA GGATGTGGAT CGGTACCTTC CATGGTTTAG CGCATCGGTT ATTGCGAACC
CATTATCAAG ACGCCAATTT ACCGCAAAGT TTCCAGATTA TCGATTCTGA CGATCAGTTA
CGCTTACTTA AACGTATTCT AAAAAGCCTT AATTTAGACG AGAAGCAATA TCCTCCTCGT
CAGGCCCAAG GTTATATTAA TGGCAAAAAA GACCAAGGAT TACGTCCAAA GCATATCGAT
GCGGGCGGCT TTCCGATTGA ACAGAATTTA CTGAATATTT ATAAGGTTTA CCAAGAGTCT
TGCGATCGTG CAGGTTTGGT CGACTTTGCC GAAATCTTAT TACGAGCTCA TGAATTATGG
CTCAATAAGC CGCATTTATT GGCACATTAT CAAGAACGCT TCCGTCATAT TTTAGTCGAT
GAGTTTCAAG ATACTAACGC GATTCAATAT GCATGGATCC GTGTGTTAGC CGGTAATACC
GCCAATGTGA TGATTGTCGG TGATGACGAT CAATCTATTT ACGGTTGGCG TGGCGCACAA
ATTGAAAACT TACATCGTTT CTTAAAAGAT TTTTCAGGCG CAACCACCAT TCGTTTAGAA
CAAAATTATC GTTCAACAGC GAATATTTTG AATGCGTCTA ACGCTGTGAT TGCCAATAAC
CCAGATCGTT TGGGCAAAGA GTTATGGACC GAAGATAAAG ATGGTGAACC CATTTCGGTT
TATTGCGCCT TTAATGAAAT GGATGAAGCC AAATTCATTG TTGGACGCAT TAGCGACTGG
CATGAAAAGG GCGGTAGTTT GAGCGAATGT GCCATTTTAT ATCGTTCAAA TGCGCAATCG
CGAGTATTAG AAGAAGCCTT TTTACACAAA GGGTTAGCGT ATCGTATTTA CGGTGGTCTG
CGCTTCTTCG AACGACAAGA AATTAAAGAT GCTATGGGCT ATATGCGTCT GATTAATAAC
CAAAATGATG ATGCAGCATT CGAGCGTGTG GTGAATACAC CAGCTCGTGG TATCGGCGAT
CGTACTTTGG ATATTATACG CTCAACCGCC AGACAGCATG AACTGACTCT GTGGCAAGCT
TGCGTGAGTT TAATCGAAGA AAAAGTCCTT GCTGGTCGTG CCGCTAATGC CATCAATGGC
TTTATGGAAC TGATTATTGC GATGCGAACT GATACGGCAG ATATGTTGCT GTACCGGATG
GCTGATGATG TGATTGATCG TTCAGGCTTG CGTACCATGT ACGAGGCCGA AAAAGGCGAG
AAAGCTCAAG CGCGAATTGA AAACTTAAAC GAGCTGGTTA CTGCTGCGCG CAGTTTTGAA
ATGCCTGAAG AACTTGAAGA CATGGGCGAA CTTAATGCCT TTTTGTCTCA TGCAGCATTA
GAAGCTGGCG AAGGTCAGGC TGATGCCTTT ACCGATGCCG TGCAGTTAAT GACATTGCAT
TCAGCCAAAG GGCTTGAGTT CCCAATGGTG TTTATGGCTG GCGTTGAAGA AGGATTATTC
CCGAGTAAGA TGGCACTAGA TGAAGGCGAT CGTTTAGATG AAGAGCGCCG TTTGTGTTAT
GTCGGTATGA CCCGTGCTAT GCAAAAACTG TACATCAGTT ATGCTGAGTC TCGTCGTATT
TATGGCCGTG AAGATTATGC TAGCCCATCA CGGTTTATTA ACGAAATTCC CGAAAAGTTT
GTTGAGCAAA TCCGTATACG TGCTCAGGTT AAGCCGTCAG TTAGTCAGCG TTTTCCTGCG
AAGGCTACGG TTGCCACTAA AAAACCTCAT GGTTTTAACG ACACCGGTCA TAAAGTGGGT
TCTAAAGTGA AGCACTTTAA GTTTGGTGAA GGTGTTGTCA CTAGTTTTGA AGGTTCTGGT
GAAAAAGGAC GTGTGCAGGT TGAGTTTGTT GATTTCGGTA GTAAATGGCT GTTGGTGTCG
TTAGCCAAAT TAGAGCGTTG TTAA
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| Protein sequence | MDVSSLLDGL NDKQREAVGA PLSNMLVLAG AGSGKTRVLT HRIAWLMQVE QQSPYSILAV
TFTNKAAAEM RERVEKVVGT NMGRMWIGTF HGLAHRLLRT HYQDANLPQS FQIIDSDDQL
RLLKRILKSL NLDEKQYPPR QAQGYINGKK DQGLRPKHID AGGFPIEQNL LNIYKVYQES
CDRAGLVDFA EILLRAHELW LNKPHLLAHY QERFRHILVD EFQDTNAIQY AWIRVLAGNT
ANVMIVGDDD QSIYGWRGAQ IENLHRFLKD FSGATTIRLE QNYRSTANIL NASNAVIANN
PDRLGKELWT EDKDGEPISV YCAFNEMDEA KFIVGRISDW HEKGGSLSEC AILYRSNAQS
RVLEEAFLHK GLAYRIYGGL RFFERQEIKD AMGYMRLINN QNDDAAFERV VNTPARGIGD
RTLDIIRSTA RQHELTLWQA CVSLIEEKVL AGRAANAING FMELIIAMRT DTADMLLYRM
ADDVIDRSGL RTMYEAEKGE KAQARIENLN ELVTAARSFE MPEELEDMGE LNAFLSHAAL
EAGEGQADAF TDAVQLMTLH SAKGLEFPMV FMAGVEEGLF PSKMALDEGD RLDEERRLCY
VGMTRAMQKL YISYAESRRI YGREDYASPS RFINEIPEKF VEQIRIRAQV KPSVSQRFPA
KATVATKKPH GFNDTGHKVG SKVKHFKFGE GVVTSFEGSG EKGRVQVEFV DFGSKWLLVS
LAKLERC
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