| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_3381 |
|---|
| Symbol | |
|---|
| ID | 4280283 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella frigidimarina NCIMB 400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008345 |
|---|
| Strand | + |
|---|
| Start bp | 4026162 |
|---|
| End bp | 4026437 |
|---|
| Gene Length | 276 bp |
|---|
| Protein Length | 91 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 638136202 |
|---|
| Product | phosphocarrier, HPr family protein |
|---|
| Protein accession | YP_752056 |
|---|
| Protein GI | 114564542 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1925] Phosphotransferase system, HPr-related proteins |
|---|
| TIGRFAM ID | [TIGR01003] Phosphotransferase System HPr (HPr) Family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.497363 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATCAAAC TTGAACGCCA AGTGACCATT TCAAATAAAT TGGGATTACA TGCCCGTGCA
GCAACAAAAC TCGCAGTATT AGCTGCGGAT TTTGATGCTA ACATCACCTT AACTCAAGGT
GAAAAAAATG CCAGCGCTGC AAGTGTGCTG GGGTTATTAA TGCTTGAAAG TGGTATTGGT
AAAATGATTA CTGTTACTGC TCAAGGCCCT GATGCTGAAG TGGCATTAAA CGCAGTGTGT
GATCTCATTA ATGCTAAATT TGATGAATCT TGTTAA
|
|---|
| Protein sequence | MIKLERQVTI SNKLGLHARA ATKLAVLAAD FDANITLTQG EKNASAASVL GLLMLESGIG
KMITVTAQGP DAEVALNAVC DLINAKFDES C
|
|---|
| |