| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_3371 |
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| Symbol | |
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| ID | 4280273 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 4018489 |
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| End bp | 4019451 |
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| Gene Length | 963 bp |
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| Protein Length | 320 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638136192 |
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| Product | Na+/Ca+ antiporter, CaCA family protein |
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| Protein accession | YP_752046 |
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| Protein GI | 114564532 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0530] Ca2+/Na+ antiporter |
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| TIGRFAM ID | [TIGR00367] K+-dependent Na+/Ca+ exchanger related-protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTAGTTA ATATCCTAAT GTTAGTTGTT GGCCTTGCTG TTTTAGTTTG GAGTGCGGAT
AGATTTGTTT ACGGAGCGGC TGCATTTGCC CGTAACTTAG GGTTACCTCC AATGTTAATT
GGACTCACCA TCGTTGCGAT GGGCAGCTCT GCACCTGAAA TGTTTGTTGC CGCCACCGCA
TCAATGGATG GCATGCGTGA TACCGCTATT GGAAACGTAT TGGGCTCAAA CATTGCCAAC
ATTACCTTAA TTTTAGGATT AACCGCCTTA CTAGGTGCCA TTAGCTTAGA TTCGAAGACC
TTAAAACGCG AAATACCTAT CATGTTAGCT GCGACGGTAT TTGCTGGTTA CACCTTGCAT
GATAATGTGT TGACACAAGC AGAAGGTATC ATGCTCATCG CATTACTTTT GCTGTTGATG
GGATATTTTA TTTGGCAAGC TACTCATGAT AAAACCCCAG ACAGCTTAGA TGATGAACTT
GAATCTGAGA TCCCTAAAAA TGTGCCAACC TTTCATGCTA TCATTTGGCT AATTGTCGGT
ATTATATTGC TCCCCCTATC AGCAAGTTGG ATGGTTGATG GCGCGGTGGG TATTGCAAAG
TTTTATGGGT TGTCAGATCT TGTGATTGGC TTAACCATTA TCGCAGTAGG AACCAGCTTA
CCTGAATTAG CGGCTTGTAT TGCTGGAGTC ATAAAAAAAG AACACGACCT CGTCATTGGT
AATATTGTTG GGTCTAACTT ATTTAACATT CTTGCGGTAC TGGCACTACC AGGATTGATT
TCTCCTGGTG AAATAGATGC TTCAGCCAGT GGAAGAGATT TCTATATGGT ATTAGGCACC
AGTGCAGCAT TAGCCGTTTT AGTATTATCC AGTGGCGCTA AGCAACAACT TACTCGCTGG
CATGGCGCAC TATTATTAAT CACCTTTATT GCGTACCAAA TTGTTGTATT TCAGTCGCAT
TAG
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| Protein sequence | MLVNILMLVV GLAVLVWSAD RFVYGAAAFA RNLGLPPMLI GLTIVAMGSS APEMFVAATA
SMDGMRDTAI GNVLGSNIAN ITLILGLTAL LGAISLDSKT LKREIPIMLA ATVFAGYTLH
DNVLTQAEGI MLIALLLLLM GYFIWQATHD KTPDSLDDEL ESEIPKNVPT FHAIIWLIVG
IILLPLSASW MVDGAVGIAK FYGLSDLVIG LTIIAVGTSL PELAACIAGV IKKEHDLVIG
NIVGSNLFNI LAVLALPGLI SPGEIDASAS GRDFYMVLGT SAALAVLVLS SGAKQQLTRW
HGALLLITFI AYQIVVFQSH
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