| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_3368 |
|---|
| Symbol | |
|---|
| ID | 4280270 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella frigidimarina NCIMB 400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008345 |
|---|
| Strand | - |
|---|
| Start bp | 4016200 |
|---|
| End bp | 4016673 |
|---|
| Gene Length | 474 bp |
|---|
| Protein Length | 157 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 638136189 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_752043 |
|---|
| Protein GI | 114564529 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG1463] ABC-type transport system involved in resistance to organic solvents, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.150445 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTGACAC GGAAAATAGA GTTAATGGTA GGCGTGTTTT TGTTGTCAGG TTTATTGGCA
TTTTGTGTAT TGGTATTCAA TGTTGCAAAT GTCGAATTAA AATCTAGCGC CCAGACTTAT
GAGTTGGTAG CCGAGTTTAA CAATGTCGGC GGTTTAAAGG TGCGTTCACC AGTAAAAGTG
GGCGGTGTTG TTGTCGGGCG TGTGACTGAT ATTACCCTTG ATACTCATAA ACTAGTGCCT
ATTGTGACGT TAACAATGGA TAAGCGCTTT GATCAATTTC CTGAAACCAG TAGTTTGGCC
ATTTTGACTT CAGGCTTGCT TGGCGAGCAG TTTATTGGTT TAACACCTGG GTTTATGGAC
GATGACATTT CGATGCTTGC CAATGGTGAT AAAGTACATG ACACGCGCGG CGCATTGATT
TTAGAAGATT TAATTGGTCA GCTGTTATAC AGCATGTCAT CTAAAGATAA ATAG
|
|---|
| Protein sequence | MLTRKIELMV GVFLLSGLLA FCVLVFNVAN VELKSSAQTY ELVAEFNNVG GLKVRSPVKV
GGVVVGRVTD ITLDTHKLVP IVTLTMDKRF DQFPETSSLA ILTSGLLGEQ FIGLTPGFMD
DDISMLANGD KVHDTRGALI LEDLIGQLLY SMSSKDK
|
|---|
| |