| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_3361 |
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| Symbol | |
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| ID | 4280263 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 4009541 |
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| End bp | 4010653 |
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| Gene Length | 1113 bp |
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| Protein Length | 370 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638136182 |
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| Product | AFG1 family ATPase |
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| Protein accession | YP_752036 |
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| Protein GI | 114564522 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1485] Predicted ATPase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00000732022 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTCGCAGT TAACCCCATG GCAGCATTAT CAGCAAGACC TTACCCGAGA TGATTTTTCA
CATGATGCCG CACAAGAACA AGCGGTTAAG TCACTACAAC GAGTCTATGA TGAATTAATT
GTCGCGGCTA AACCTGCATC TAGCGTGAGT AAATTATTTA GCGCAATAGG AATCAAGTCG
ACACCTACAC CAGTAAAAGG TTTGTATTTA TGGGGTGGCG TTGGCCGAGG TAAAACCTAT
CTGATGGACA CCTTTTTTGA TGCATTGCCA ACAGATCGAA AATTACGTGC TCATTTCCAC
CGCTTTATGC ACCAAATTCA TAATGACTTA GGTGAACTCA AAGGTGTGCA AGATCCTCTG
CTTACTATTG CAAAAAAGAT GGCTTCGCAA TATCAAATTA TCTGTTTCGA TGAGTTTTTT
GTGTCGGATA TCACCGATGC CATGCTGCTA GGAACGTTAT TTCAAGCATT ATTTAAAGAA
GGGGTTGCCC TCGTCGCTAC CTCAAATATC ATTCCTGATG AATTATACAA AAATGGCTTA
CAACGGGTGC GCTTTTTACC TGCCATAGCC TTGATTAACC AACACTGTGA AATCTTAAAT
GTTGATTCTG GAATTGATTA CCGTCTGCGT ACTTTAGAGC AGGCAGAGAT TTATCATTAT
CCACTCGATG AACAAGCTGA CATCAATTTA TTACATTACT TTGACCAGTT GGCGCCGGAA
TCTGAAAAAC TTACTGCTCC TATAGACGTT GATGGACGTG CAATTCGAAT TCGTCAGCAG
TCGCAAGGGG TGCTGTTAAT CAACTTCCGC GATTTATGTG ATGGGCCTCG CTCACAGCGT
GACTATATGG AAATGGCTTG CCTCTATCAT ACTGTGCTGG TGAGTGGTTT AGAGCAAATG
GGCTCACAGC AAACGGGTGA TGATATTGCC AGACGCTTCT TGGCTATGGT TGATGAATTC
TACGAAAGAA ATGTCAAATT GATTATTTCA GCCCAAGTCG AATTGGAACA TATTTATACC
GATGGCCAGT TAAATTTTGA ATTCAGACGC TGTCGTTCAA GGCTGATTGA AATGCAATCA
AGAGAGTATC TGGCGCTGGA ACATTTGCCT TAA
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| Protein sequence | MSQLTPWQHY QQDLTRDDFS HDAAQEQAVK SLQRVYDELI VAAKPASSVS KLFSAIGIKS
TPTPVKGLYL WGGVGRGKTY LMDTFFDALP TDRKLRAHFH RFMHQIHNDL GELKGVQDPL
LTIAKKMASQ YQIICFDEFF VSDITDAMLL GTLFQALFKE GVALVATSNI IPDELYKNGL
QRVRFLPAIA LINQHCEILN VDSGIDYRLR TLEQAEIYHY PLDEQADINL LHYFDQLAPE
SEKLTAPIDV DGRAIRIRQQ SQGVLLINFR DLCDGPRSQR DYMEMACLYH TVLVSGLEQM
GSQQTGDDIA RRFLAMVDEF YERNVKLIIS AQVELEHIYT DGQLNFEFRR CRSRLIEMQS
REYLALEHLP
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