| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_3360 |
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| Symbol | rplM |
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| ID | 4280262 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 4008849 |
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| End bp | 4009277 |
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| Gene Length | 429 bp |
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| Protein Length | 142 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638136181 |
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| Product | 50S ribosomal protein L13 |
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| Protein accession | YP_752035 |
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| Protein GI | 114564521 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0102] Ribosomal protein L13 |
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| TIGRFAM ID | [TIGR01066] ribosomal protein L13, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0000000892865 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAGACTT TTACTGCTAC ACCAGAAACT GTAACTCGTG ACTGGTTTGT TGTTGACGCT
GAAGGCAAAA CTTTAGGCCG TATCGCAACT GAAATCGCAA CTCGCTTACG TGGCAAGCAT
AAGCCAGAAT ACACTCCACA CGTTGACACT GGTGATTATA TCATCGTTAT CAATGCTGAA
AAAGTGACTG TAACTGGTAA TAAAGCTGCT GGTAAGATCT ACTACTCTCA TTCAGGCTTC
ATTGGTGGCA TTAAGCAAAT CAGCTTTGAG AAGCTTCAAG CTCATAAGCC TGAAATGATC
ATCGAGAAAG CAGTTAAGGG TATGTTACCA AAAGGTCCTT TGGGCCGTGC CATGTTCCGT
AAGCTTAAAG TTTACGCTGG CACAGAACAT AACCACGCTG CACAACAACC ACAAGTTCTT
GATATCTAA
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| Protein sequence | MKTFTATPET VTRDWFVVDA EGKTLGRIAT EIATRLRGKH KPEYTPHVDT GDYIIVINAE
KVTVTGNKAA GKIYYSHSGF IGGIKQISFE KLQAHKPEMI IEKAVKGMLP KGPLGRAMFR
KLKVYAGTEH NHAAQQPQVL DI
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