Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_3351 |
Symbol | rpsF |
ID | 4280253 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | - |
Start bp | 3999411 |
End bp | 3999803 |
Gene Length | 393 bp |
Protein Length | 130 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 638136172 |
Product | 30S ribosomal protein S6 |
Protein accession | YP_752026 |
Protein GI | 114564512 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0360] Ribosomal protein S6 |
TIGRFAM ID | [TIGR00166] ribosomal protein S6 |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.000000274411 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGTCATT ATGAAATCGT ATTTATGGTT CACCCAGATC AAAGTGAACA AGTCCCAGGT ATGATTGAGC GTTACACCGG TGTTATCACC GCTGCTAATG GTACAGTCCA CCGTTTAGAA GATTGGGGCC GTCGTCAATT GGCTTACCCG ATCCAAGACC TACATAAAGC TCACTATGTT CTTTTGAACG TAGAAGCATC TGCAGAGTCT ATCGAAGAAC TAGAAACAGC TTTCCGTTTC AACGACGCTG TTCTGCGTAA CATGGTAATG CGCACTAAAG CTGCCGTTAC TGAAGCTTCT CCTATGGCAA AAGCAAGAGA CGAGCGTGAT TCACGTCGTT CACCTTCTGA TGACCGTAAT GTAGAAGAAA GCGCTGAAGA AAACGCTGAA TAA
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Protein sequence | MRHYEIVFMV HPDQSEQVPG MIERYTGVIT AANGTVHRLE DWGRRQLAYP IQDLHKAHYV LLNVEASAES IEELETAFRF NDAVLRNMVM RTKAAVTEAS PMAKARDERD SRRSPSDDRN VEESAEENAE
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