Gene Sfri_3351 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_3351 
SymbolrpsF 
ID4280253 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand
Start bp3999411 
End bp3999803 
Gene Length393 bp 
Protein Length130 aa 
Translation table11 
GC content45% 
IMG OID638136172 
Product30S ribosomal protein S6 
Protein accessionYP_752026 
Protein GI114564512 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0360] Ribosomal protein S6 
TIGRFAM ID[TIGR00166] ribosomal protein S6 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000274411 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTCATT ATGAAATCGT ATTTATGGTT CACCCAGATC AAAGTGAACA AGTCCCAGGT 
ATGATTGAGC GTTACACCGG TGTTATCACC GCTGCTAATG GTACAGTCCA CCGTTTAGAA
GATTGGGGCC GTCGTCAATT GGCTTACCCG ATCCAAGACC TACATAAAGC TCACTATGTT
CTTTTGAACG TAGAAGCATC TGCAGAGTCT ATCGAAGAAC TAGAAACAGC TTTCCGTTTC
AACGACGCTG TTCTGCGTAA CATGGTAATG CGCACTAAAG CTGCCGTTAC TGAAGCTTCT
CCTATGGCAA AAGCAAGAGA CGAGCGTGAT TCACGTCGTT CACCTTCTGA TGACCGTAAT
GTAGAAGAAA GCGCTGAAGA AAACGCTGAA TAA
 
Protein sequence
MRHYEIVFMV HPDQSEQVPG MIERYTGVIT AANGTVHRLE DWGRRQLAYP IQDLHKAHYV 
LLNVEASAES IEELETAFRF NDAVLRNMVM RTKAAVTEAS PMAKARDERD SRRSPSDDRN
VEESAEENAE