| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_3349 |
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| Symbol | rpsR |
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| ID | 4280251 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 3998862 |
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| End bp | 3999089 |
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| Gene Length | 228 bp |
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| Protein Length | 75 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638136170 |
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| Product | 30S ribosomal protein S18 |
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| Protein accession | YP_752024 |
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| Protein GI | 114564510 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0238] Ribosomal protein S18 |
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| TIGRFAM ID | [TIGR00165] ribosomal protein S18 |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.000024458 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCACGTT ATTTCCGTCG TCGCAAGTTC TGCCGCTTCA CCTCTGAAGG TGTTGTCGAG
ATTGATTACA AAGATATCGT TACTTTAAAG AACTACATCA CTGAAAGCGG CAAGATTGTT
CCTAGCCGTA TCACTGGTAC CAGTGCTAGA TATCAACGCC AACTAGCTCG CGCTATCAAG
CGTGCTCGTT ATCTTTCTCT ACTGCCATAT ACTGATTTAC ATCAGTAA
|
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| Protein sequence | MARYFRRRKF CRFTSEGVVE IDYKDIVTLK NYITESGKIV PSRITGTSAR YQRQLARAIK
RARYLSLLPY TDLHQ
|
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