Gene Sfri_3348 details

Gene Information

• Locus tag: Sfri_3348
• Symbol: rplI
• ID: 4280250
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella frigidimarina NCIMB 400
• Kingdom: Bacteria
• Replicon accession: NC_008345
• Strand: -
• Start bp: 3998364
• End bp: 3998816
• Gene Length: 453 bp
• Protein Length: 150 aa
• Translation table: 11
• GC content: 40%
• IMG OID: 638136169
• Product: 50S ribosomal protein L9
• Protein accession: YP_752023
• Protein GI: 114564509
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0359] Ribosomal protein L9
• TIGRFAM ID: [TIGR00158] ribosomal protein L9

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 0.000169987
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAACGTTA TTTTGCTAGA TAAAGTTGCA AACTTAGGTA GCTTAGGCGA CCAAGTTTCT 
GTTAAAGCTG GTTATGCTCG TAACTTCCTT TTACCTTATG GTAAAGCAGT TGTAGCAAAC 
GCAGCAAACA CTGAAGTATT TGAAGCTCGT CGTGCTGAAT TAGAAGCTAA ATTAGCTGCT 
GAATTAGCTA CTGCGACAGC TCGTGCTGAT AAATTAACTG CATTAGAAGC TGTTGTTATT 
GCTTCTAAAG CAGGTGATGA AGGTAAATTA TTCGGATCAA TTGGCAACCG TGATATCGCT 
GATGCAGTTA CTGCAGCTGG CGTAGCACTT GCTAAATCTG AAGTTCGTTT ACCTTTAGGT 
GCTTTACGCA CTACTGGTAG CTTCGAAATT GAAGTTCAAG TACACGCTGA AGTTAAAGCT 
GTAGTTAAGA TTGCTATTGT AGCAGAAGCT TAA 

 

Protein sequence

MNVILLDKVA NLGSLGDQVS VKAGYARNFL LPYGKAVVAN AANTEVFEAR RAELEAKLAA 
ELATATARAD KLTALEAVVI ASKAGDEGKL FGSIGNRDIA DAVTAAGVAL AKSEVRLPLG 
ALRTTGSFEI EVQVHAEVKA VVKIAIVAEA