| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_3345 |
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| Symbol | alr |
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| ID | 4280247 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 3992551 |
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| End bp | 3993669 |
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| Gene Length | 1119 bp |
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| Protein Length | 372 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638136166 |
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| Product | alanine racemase |
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| Protein accession | YP_752020 |
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| Protein GI | 114564506 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0787] Alanine racemase |
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| TIGRFAM ID | [TIGR00492] alanine racemase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAAACCTT TTCCTCGTGC AGAAATCAGT CGTTACGCAT TGCAAAGTAA CTTGGCACAA
CTGCGCCTTA TTGCGCCCAA TAGTAAAATT ATGGCAGTGG TTAAAGCCAA TGGTTATGGC
CATGGATTAT TAAATGTTGC TGAATGTGTT GGCTTATTAA ATTATGTAGA AAGCGTCTGC
AAGTATCATG GCGGCGCAGA TGGTTTTGGA TTAGCAAGGC TTGAAGAAGC GTTGCAACTC
AGAGAAGGCG GTGTAAAAGG TAAGCTTTTA TTATTAGAAG GTTTCTTCCG TCAGTCTGAT
TTACCCACAC TGGTTAGCCA CAATATTGAT ACTGTGGTTC ATCATGAATC GCAATTGCAA
ATGCTTGAAA CTATCGCGCT AGATAAGCCT GTCACCGTAT GGATAAAAAT TGATACTGGT
ATGCATCGTA TTGGCTTTAG TCTTGAACAA TTCAACAGTA TTTATCAGCG CTTGCTGGCT
TGTCCGCAAG TGGCTAAACC GATTCATTTA ATGACCCACT TTGCATGCGC CGACGAACCC
GATAATCCTC TCACTCAAAC GCAAATGAAT GCCTTTGAGC AACAGGTTAG CGGCTTAGAA
GGCGATCGCA CCTTAGCAAA TTCTGCAGGT ACCTTATTTT GGCCAACAAG CCAAGCCGAC
TGGGTAAGAC CCGGCATTGC GCTTTATGGT GTATCTCCAG TTGTGGGTGA TCGAGGCGTT
AATCATCGAT TAATTCCAGC GATGGAGTTA GTCTCCAATT TAATCGCGGT GCGCGAGCAT
AAAGCCGGTG ATAGTGTCGG TTATGGTGCA TCTTGGACCG CTAAAAAAGA CACTCGTTTA
GGGGTTGTTG CCATTGGTTA TGGTGATGGT TACCCACGTA ATGCGCCAGA AGGTACACCG
GTGTGGATTA ACGGCCGCAG AGTACCGATA GTCGGTCGAG TGTCTATGGA CATGTTAACC
GTAGATTTAG GTGCTGATGC ACAAGATAAC GTCGGCGATA GCGTTCAACT GTGGGGCAAA
GCACTTGCAG TAGAAGAAGT GGCCGAGCAC ATTGGCACCA TAGCTTATGA GTTAGTCACT
AAGCTTACGC CGCGCGTGGT AGTTGAATTG CTCGATTGA
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| Protein sequence | MKPFPRAEIS RYALQSNLAQ LRLIAPNSKI MAVVKANGYG HGLLNVAECV GLLNYVESVC
KYHGGADGFG LARLEEALQL REGGVKGKLL LLEGFFRQSD LPTLVSHNID TVVHHESQLQ
MLETIALDKP VTVWIKIDTG MHRIGFSLEQ FNSIYQRLLA CPQVAKPIHL MTHFACADEP
DNPLTQTQMN AFEQQVSGLE GDRTLANSAG TLFWPTSQAD WVRPGIALYG VSPVVGDRGV
NHRLIPAMEL VSNLIAVREH KAGDSVGYGA SWTAKKDTRL GVVAIGYGDG YPRNAPEGTP
VWINGRRVPI VGRVSMDMLT VDLGADAQDN VGDSVQLWGK ALAVEEVAEH IGTIAYELVT
KLTPRVVVEL LD
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