Gene Sfri_3344 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_3344 
Symbol 
ID4280246 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand
Start bp3991917 
End bp3992384 
Gene Length468 bp 
Protein Length155 aa 
Translation table11 
GC content38% 
IMG OID638136165 
ProductCheC domain-containing protein 
Protein accessionYP_752019 
Protein GI114564505 
COG category[N] Cell motility 
COG ID[COG1406] Predicted inhibitor of MCP methylation, homolog of CheC 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACGTTG AATTCATCAA CCCATTTCTT GTGTCTTTAA TCAATGTTAT CTCAACCATG 
GCAACCATGG ATCTTAAGCC AGGTAAACCA CAATTAAAAA ACCATGACCT TGCAAAAGGT
GACGTATCAG GCTTGATTGG TATGGTAGGA CCTAAAACTC GTGGCTCATT GTCGATTACC
TTCGAGCAAC CGCTTATTCT TGAAATTATG AATAAAATGC TTGGTGAAAA GCCTGAGTTT
ATTAATGATG AGGTGACTGA TTTAGTCGGT GAAATTACGA ATATGGTGAC TGGCGGCGCT
AAAAACTTAC TCAGTGAAAA AGGTTACGAC TTTGATATGG CGACACCGGC TGTTGTATCT
GGTAAAAACC ATACTATTTC TCATAAAGCG CGTGGTAAAA AAATCATGAT GCCTTTTAGC
CACGAATTCG GTAACGCTTT TATTGAAATT TGTTTTGAAG ACTCTTAA
 
Protein sequence
MNVEFINPFL VSLINVISTM ATMDLKPGKP QLKNHDLAKG DVSGLIGMVG PKTRGSLSIT 
FEQPLILEIM NKMLGEKPEF INDEVTDLVG EITNMVTGGA KNLLSEKGYD FDMATPAVVS
GKNHTISHKA RGKKIMMPFS HEFGNAFIEI CFEDS