Gene Sfri_3343 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_3343 
Symbol 
ID4280245 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand
Start bp3990824 
End bp3991219 
Gene Length396 bp 
Protein Length131 aa 
Translation table11 
GC content40% 
IMG OID638136164 
Productcupin 2 domain-containing protein 
Protein accessionYP_752018 
Protein GI114564504 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTCGAAAT CTGTAGCAAT CACAATAAAC GATCAATTTT CACGAGTTGA GTTTCTGAAA 
GATAGAACGC CAGAAACCAC TAATGAACAA GCGAAAAATG CTTTTGCGCT ATTATCTGAA
TATCGAGACG GTGGAATATA CATCGCTCAT TATTCTGGTT TTAGTGAGTG GGAAAAGCAT
CCAAAAGGTG ACGAGTTTGT TCAGGTTTTA GGGGGAGAAA CTACATTGGT TCTTTTAGTT
GAAAACGTAG AGCAACGTAA CCTTTTATCG ACGGGGAAAA TGCTGGTTAT CCCCAAAGAT
GTTTGGCATC GTTTTGAATC ACCAGAAGGT GTTAAAGTCA TGACAATAAC GCCGCAACCA
ACAGAACATA GTATCGAGCA GCCAAACGGT ATATAA
 
Protein sequence
MSKSVAITIN DQFSRVEFLK DRTPETTNEQ AKNAFALLSE YRDGGIYIAH YSGFSEWEKH 
PKGDEFVQVL GGETTLVLLV ENVEQRNLLS TGKMLVIPKD VWHRFESPEG VKVMTITPQP
TEHSIEQPNG I