Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_3343 |
Symbol | |
ID | 4280245 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | - |
Start bp | 3990824 |
End bp | 3991219 |
Gene Length | 396 bp |
Protein Length | 131 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 638136164 |
Product | cupin 2 domain-containing protein |
Protein accession | YP_752018 |
Protein GI | 114564504 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGTCGAAAT CTGTAGCAAT CACAATAAAC GATCAATTTT CACGAGTTGA GTTTCTGAAA GATAGAACGC CAGAAACCAC TAATGAACAA GCGAAAAATG CTTTTGCGCT ATTATCTGAA TATCGAGACG GTGGAATATA CATCGCTCAT TATTCTGGTT TTAGTGAGTG GGAAAAGCAT CCAAAAGGTG ACGAGTTTGT TCAGGTTTTA GGGGGAGAAA CTACATTGGT TCTTTTAGTT GAAAACGTAG AGCAACGTAA CCTTTTATCG ACGGGGAAAA TGCTGGTTAT CCCCAAAGAT GTTTGGCATC GTTTTGAATC ACCAGAAGGT GTTAAAGTCA TGACAATAAC GCCGCAACCA ACAGAACATA GTATCGAGCA GCCAAACGGT ATATAA
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Protein sequence | MSKSVAITIN DQFSRVEFLK DRTPETTNEQ AKNAFALLSE YRDGGIYIAH YSGFSEWEKH PKGDEFVQVL GGETTLVLLV ENVEQRNLLS TGKMLVIPKD VWHRFESPEG VKVMTITPQP TEHSIEQPNG I
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