Gene Sfri_3342 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_3342 
Symbol 
ID4280244 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand
Start bp3990055 
End bp3990576 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content40% 
IMG OID638136163 
Producthypothetical protein 
Protein accessionYP_752017 
Protein GI114564503 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATGGAA AATCATTAAT CGTTATTTTA ATAATGGTGT CAGCTTCAGC TTCAGCTTCA 
GCTTCTGCAG AAGTATATAA GTGTGCGGAT GGTAAGTATC AAGCAGACCC GTGCGACGAC
CAAAGTGAAC CGTTAGATTT AAGTAATGTA GGTAGTGTGG TTGCACCATC AAGAGGTTAC
CCTGAAAACC TAACGAACGA GACAATAGAT GCAAGGCAAC AGGATAGTGC TGTTAATCCG
CGTGATAAAA AAGCTGAAAT CGCTCAATAC TTACGTAAAC AAAAAATTGA ACGTGAAATT
AGAAACCTCG AAAAAGCACG GAAAAAAGCG TTCAAAGATC GTGATGACAA AATTGAACAA
TTGCGTACAA CTGGTAAGCG AGCTAACAAT AATTTAGCGG GTGCAACTTG GCAGCAAAGT
CTAGCGCAAG AAATGACTGC AGTTATGCAA CAGGGCAGTA CCGAAGTCGA ATCTATTGAC
CGTCAAATAT CTGCGCTTAA GTCTGAATTA AAACAACTGT AA
 
Protein sequence
MDGKSLIVIL IMVSASASAS ASAEVYKCAD GKYQADPCDD QSEPLDLSNV GSVVAPSRGY 
PENLTNETID ARQQDSAVNP RDKKAEIAQY LRKQKIEREI RNLEKARKKA FKDRDDKIEQ
LRTTGKRANN NLAGATWQQS LAQEMTAVMQ QGSTEVESID RQISALKSEL KQL