| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_3341 |
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| Symbol | |
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| ID | 4280243 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 3988537 |
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| End bp | 3989586 |
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| Gene Length | 1050 bp |
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| Protein Length | 349 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638136162 |
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| Product | tRNA-dihydrouridine synthase A |
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| Protein accession | YP_752016 |
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| Protein GI | 114564502 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0042] tRNA-dihydrouridine synthase |
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| TIGRFAM ID | [TIGR00742] tRNA dihydrouridine synthase A |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTATAA AAAATTCAGT GAATACAACG CCAAAGCTAG TCATACCAAC AGATACGCTT
GATCGCACCT TTTCCATTGC GCCGATGCTG GATTGGACAG ATCGCCACTA TCGTTACTTT
GCACGCCTTA TGTCGAGTAA AGCCTTGTTG TATACCGAGA TGATCACCAC GGGTGCTATA
TTGCAAGGTA AGGGCGACTA TTTAGCTTAT AACGAGCAAG AGCATCCTGT GGCGTTACAG
TTGGGTGGCT CTAATGCTGT TGATTTAGCG GCGTGTGCCA AATTGGCTGC TGAGCGCGGT
TATGATGAAG TGAACCTCAA TGTAGGGTGT CCGTCTGATA GAGTGCAGAA TGGTCGCTTT
GGTGCATGTT TAATGGCTGA ACCTGCGTTA GTTGCGCAAT GTGTTGATGC GATGAAGCAG
GTAACTGATA TTCCGATCAC GGTAAAAACC CGTATTGGGA TTGACGAGCA AGACAGTTAT
CAGTTTTTAA CGGATTTTAT TGAAACCGTG AGCGCCCAGG GCTGTAGTGC ATTTACGATT
CATGCGCGTA AAGCGTGGTT ACAAGGGTTA AGTCCGAAAG AAAATCGTGA GATCCCGCCG
TTAGATTATG ATCGGGTTTA CCAGTTAAAG CGTGATTATC AGCACTTGAA CATTAGCATT
AACGGTGGCA TTAAAACCCT TGAAGAATCT AAGCTGCATT TAGCCCTGCT AGATGGCGTG
ATGGTGGGGC GTGAAGCTTA TCAAAACCCT TATATATTGG CGCAAGTGGA TCAGCAGTTG
TGTGGACTCG ATACAGCGGT TATTACTCGT CAGCAAGTCA TTGAGCAAAT GTTGCCGTAT
ATTGAAGCTC ATTTAGCCCA AGGTGGTCGT TTAAATCACA TTACCCGCCA TATGATTGGT
TTATTCCAAG GATTGCCGGG TTCGCGTGGC TGGCGTCGTC ATTTGAGTGA GAATGCTCAT
AAGCCTAATG CTGATATTGG GGTGGTGCTC AAAGCTGCTG AGTTTGTCGA TGCAGAAGCA
TTGGCCAGTG ACGAATCTAC TTTGATATAA
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| Protein sequence | MSIKNSVNTT PKLVIPTDTL DRTFSIAPML DWTDRHYRYF ARLMSSKALL YTEMITTGAI
LQGKGDYLAY NEQEHPVALQ LGGSNAVDLA ACAKLAAERG YDEVNLNVGC PSDRVQNGRF
GACLMAEPAL VAQCVDAMKQ VTDIPITVKT RIGIDEQDSY QFLTDFIETV SAQGCSAFTI
HARKAWLQGL SPKENREIPP LDYDRVYQLK RDYQHLNISI NGGIKTLEES KLHLALLDGV
MVGREAYQNP YILAQVDQQL CGLDTAVITR QQVIEQMLPY IEAHLAQGGR LNHITRHMIG
LFQGLPGSRG WRRHLSENAH KPNADIGVVL KAAEFVDAEA LASDESTLI
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