Gene Sfri_3335 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_3335 
Symbol 
ID4280237 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand
Start bp3984518 
End bp3985006 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content40% 
IMG OID638136156 
Producthypothetical protein 
Protein accessionYP_752010 
Protein GI114564496 
COG category[S] Function unknown 
COG ID[COG2847] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0452404 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGTTTA AGACATTGAA AGCAATATTC AAACATCTGT TTAACTTTTT AGTGTTATCA 
TCATTATCAT TCGCAGCCAC TGCTAACGTT GTCTTGGTCG ATGGACATGT TAGAGCTATG
CCTGCGAGTG TGCCCAATAC CGCCGCTTAT TTTACGTTAG AAAATCATAA CAACAGTGAT
GTTAAGTTAG TTGAAGTGAA GACGAGTGTG GCAAAAGTAG CGCAGTTGCA TACAATTTTA
GAAGAAGATG GCATGGTTAA AATGCGTCAA GTCGAAGGGT TTACCATACC GTCTCACGGT
TCGTTAACGC TTCAACCTAC TGGCGACCAT GTGATGTTGT TGTCGTTAAC TGCGCCATTG
GTTATTGATG ACAAAGTGCC TTTAGAATTA ATTTTTGAAG ATGGTCAGCA TCTTATGATT
GAGCTTACTG TGCTTAAACA AGCCGCGGCT CAACATGATG AACATGCAGA ACATCATCAC
CATCATTAA
 
Protein sequence
MEFKTLKAIF KHLFNFLVLS SLSFAATANV VLVDGHVRAM PASVPNTAAY FTLENHNNSD 
VKLVEVKTSV AKVAQLHTIL EEDGMVKMRQ VEGFTIPSHG SLTLQPTGDH VMLLSLTAPL
VIDDKVPLEL IFEDGQHLMI ELTVLKQAAA QHDEHAEHHH HH