Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_3335 |
Symbol | |
ID | 4280237 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | - |
Start bp | 3984518 |
End bp | 3985006 |
Gene Length | 489 bp |
Protein Length | 162 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 638136156 |
Product | hypothetical protein |
Protein accession | YP_752010 |
Protein GI | 114564496 |
COG category | [S] Function unknown |
COG ID | [COG2847] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.0452404 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAGTTTA AGACATTGAA AGCAATATTC AAACATCTGT TTAACTTTTT AGTGTTATCA TCATTATCAT TCGCAGCCAC TGCTAACGTT GTCTTGGTCG ATGGACATGT TAGAGCTATG CCTGCGAGTG TGCCCAATAC CGCCGCTTAT TTTACGTTAG AAAATCATAA CAACAGTGAT GTTAAGTTAG TTGAAGTGAA GACGAGTGTG GCAAAAGTAG CGCAGTTGCA TACAATTTTA GAAGAAGATG GCATGGTTAA AATGCGTCAA GTCGAAGGGT TTACCATACC GTCTCACGGT TCGTTAACGC TTCAACCTAC TGGCGACCAT GTGATGTTGT TGTCGTTAAC TGCGCCATTG GTTATTGATG ACAAAGTGCC TTTAGAATTA ATTTTTGAAG ATGGTCAGCA TCTTATGATT GAGCTTACTG TGCTTAAACA AGCCGCGGCT CAACATGATG AACATGCAGA ACATCATCAC CATCATTAA
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Protein sequence | MEFKTLKAIF KHLFNFLVLS SLSFAATANV VLVDGHVRAM PASVPNTAAY FTLENHNNSD VKLVEVKTSV AKVAQLHTIL EEDGMVKMRQ VEGFTIPSHG SLTLQPTGDH VMLLSLTAPL VIDDKVPLEL IFEDGQHLMI ELTVLKQAAA QHDEHAEHHH HH
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