Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_3333 |
Symbol | |
ID | 4280235 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | - |
Start bp | 3982797 |
End bp | 3983531 |
Gene Length | 735 bp |
Protein Length | 244 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 638136154 |
Product | hypothetical protein |
Protein accession | YP_752008 |
Protein GI | 114564494 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0150205 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAAAAGA CTCTTCTTGC CACAGCTGTA GTGGGCCTTT TAAGTGTGTC ATCGGCTCAT GCGGCAACTG TATTGGGTTT TAAAGTAGGC GCTGATTATT GGCAGGCAGA CACCACAAAT GCATTTAATG ATGATAGTGG TGTTGCTCAC AGCTTTAATG ATGATTCTTC ACAGGGTAGC TTGTGGATTG CTGTTGAGCA TCCATTGCCG TTTGTGCCTA ATGTTAAAAT TCGTGAAAAC CGTCTTGAGT CGAGCACGAG TCTTGCTAAT GCCGACTTTA ACTTTAACGG TCACAATTTT ACTGGCGCAA CATCGGTGAC GAATGACTTA AGCAATACTG ACTTTGTATT GTATTACGAA ATTCTTGATA ACGATTTAGT GTCAGTTGAT TTAGGTGCGG CATACAAGTT AATGAGTGGC TCATTACGTG TTGCTGATGC GGGTCACCCA GAAGAAGTGG ATATCGATAG TGGTATCGTG ATGGGATACG CCAGTGCACA AGTTGGCATG ATTGGCTTAG GCTTGTTTGG CTTTGCTGAT GTGATGCTAG GCATCGATGA ATCTAATGTA TATGATTACG GTGCAGGTTT AGGATGGCAG TTTGACGGAT TAGCTGTCGA TACTTCTATC CGTGTTGGTT ACCGCGAGTT TAATTTTGAT GTAAGCAACT TCTCTGGTGT TTCTCAAAAT ACTGACTTTA GTGGTGCATT TGCTGGTGTT GAATTAGTTT TCTAA
|
Protein sequence | MKKTLLATAV VGLLSVSSAH AATVLGFKVG ADYWQADTTN AFNDDSGVAH SFNDDSSQGS LWIAVEHPLP FVPNVKIREN RLESSTSLAN ADFNFNGHNF TGATSVTNDL SNTDFVLYYE ILDNDLVSVD LGAAYKLMSG SLRVADAGHP EEVDIDSGIV MGYASAQVGM IGLGLFGFAD VMLGIDESNV YDYGAGLGWQ FDGLAVDTSI RVGYREFNFD VSNFSGVSQN TDFSGAFAGV ELVF
|
| |