Gene Sfri_3328 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_3328 
Symbol 
ID4280230 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand- 
Start bp3978336 
End bp3978908 
Gene Length573 bp 
Protein Length190 aa 
Translation table11 
GC content40% 
IMG OID638136149 
Producthypothetical protein 
Protein accessionYP_752003 
Protein GI114564489 
COG category[R] General function prediction only 
COG ID[COG3150] Predicted esterase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.33198 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGCTTT ATATACATGG TTTTAATAGT TCTCCTCAGT CGGATAAAGC CGTTCAAACC 
GCACATTATA TTCAGCAACA TTATCCACAA GTCGATTTTT ACCAACCACA ACTACCTTCA 
TCACCTTCAG TAGCAATGGC TTTATTGTGC AACATCGCTG AGCAAGCGAA ACAGCAAGGG 
CAGACATTGC GTTTTATTGG CTCGTCATTA GGTGGCTATT TTGCCAGTTA TTTAACCGAA 
ACGTATGGTG GTAGAGCAGT TTTGATTAAT CCGGCGGTAA AACCGTTCGA ATTATTTGAA 
GAGTTTATCG GGCCTCAATA TAATCCCTAT ACCAACGAGC ATTATCAAGT TCTACCGCAG 
CATCAAGATG ATGTTGCGTT GTATAATACT CATGTGATCC GGCACCCGGA TCGTTTCCTA 
GTGCTGTTGC AAACTGGTGA CGAAGTGTTA GATTATCGAC AAGCATTACA TAAGTACCAT 
AGCTGTGAAT TACATTTAGA GCCTAATGGC GACCACAGTT TTGTCGGTTA TGAACAACAA 
TTAGACAAAA TATGTAAATT TATTCAGTTG TAA
 
Protein sequence
MLLYIHGFNS SPQSDKAVQT AHYIQQHYPQ VDFYQPQLPS SPSVAMALLC NIAEQAKQQG 
QTLRFIGSSL GGYFASYLTE TYGGRAVLIN PAVKPFELFE EFIGPQYNPY TNEHYQVLPQ 
HQDDVALYNT HVIRHPDRFL VLLQTGDEVL DYRQALHKYH SCELHLEPNG DHSFVGYEQQ 
LDKICKFIQL