| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_3325 |
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| Symbol | |
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| ID | 4280227 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 3972874 |
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| End bp | 3975177 |
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| Gene Length | 2304 bp |
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| Protein Length | 767 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638136146 |
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| Product | DNA topoisomerase IV subunit A |
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| Protein accession | YP_752000 |
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| Protein GI | 114564486 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0188] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit |
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| TIGRFAM ID | [TIGR01062] DNA topoisomerase IV, A subunit, proteobacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.846721 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTGATG CGATTGAATT AAGCCTTGAT GGTGTAGAGC AAATGCCGCT GAGGCGCTTT
ACCGAAGGGG CTTATTTAAA TTATTCCATG TACGTGATTA TGGATCGCGC CCTACCGCAC
ATTGGTGATG GTCTAAAACC CGTCCAACGA CGCATTATCT ATGCAATGAG CGAGTTAGGT
TTATCTGCGC AATCTAAGCA CAAAAAATCA GCCCGTACTG TCGGTGACGT GTTAGGTAAA
TATCACCCGC ATGGTGATAG TGCGTGTTAC GAAGCGATGG TGTTAATGGC GCAGCCATTT
TCCTATCGAT ATCCGCTGGT TGACGGCCAA GGTAACTGGG GCGCGCCAGA TGATCCTAAG
TCATTTGCTG CAATGCGTTA TACCGAAGCT AGATTATCAA AGTTTTCTGA AGTGTTACTG
TCGGAATTAG GACAGGGTAC CGTAGATTGG AGCCCTAACT TTGATGGCAC CATGAAAGAG
CCTGTAACCT TACCAGCACG ATTACCGCAT ATATTATTGA ATGGTATTAC CGGTATCGCG
GTTGGCATGG CAACGGATAT TCCGCCGCAT AATGTGCATG AATTAGTGGG CGCCTGTATA
GAGCTAATCG ATAATCCTAA AGCGGATTTA GCACGCCTAA TGGAGTTTGT TCCAGGCCCT
GATTACCCAA CAGAAGCCGA AATAATTACC CCTAGAGCTG ATATTGAGCG GATTTATGAT
ACGGGTAAAG GCTCAATCAG GGCGCGTGCA GTTTACAGTG AAGAGCAGGG CGAGATTGTT
ATTACTTCAT TACCGCATCA AGCCAGTAGC GGTAAGATTT TAGAACAAAT TGCCAATCAA
ATGCAGGCAA AAAAGTTGCC GATGGTGTCT GATTTACGTG ATGAATCTGA TCATGAAAAC
CCAGTGCGAT TAGTGATTGT ACCTCGTTCA AATCGCATTG ATTGTGATCA GCTAATGACC
CATTTATTTG CGACGACAGA TCTTGAAAAA AGCTTCCGAG TTAACCTCAA TGTGTTGGGG
CTCGACGGCC GTCCGAAAGT AAAAGGGCTA AAACAACTGT TAACTGAGTG GTTAGAATTT
CGCCTTACAA CAGTCACTCG CCGCTTGCAA TATCGACTTG ATAAAGTATT AGCACGGTTA
CATATTTTAG AAGCATTAAT GGTTGCGTTT TTAAACATTG ATGAAGTGAT CGAAATTATT
CGTTATAACG ACGAACCTAA AGCTGAGTTG ATGGCTCGCT TTAACTTGTC GGATAAACAA
GCTGAATCAA TTTTAGAGTT AAAATTACGT CATTTAGCCA AGCTTGAAGA ATTTAAAATT
AAAGGTGAGC AAGATGAGCT TGCGGCAGAA CGTGACAAAT TAGAGTTATT GTTAAGCTCT
GAACGTCGCT TGAAAACCTT AGTGAAAAAA GAATTGATCC AAGATGGTGA GACTTATGGT
GATAATCGTC GTTCGCCTAT TATTGAACGT GTAGATGCCA AAGCGCTGAC TGAGCAAGAG
TTAACGCCAA CAGAGTCTGT CACTGTTGTA TTGTCTGATA AAGGCTGGGT ACGTTGCGCT
AAAGGCCATG ATGTCGATGT AGAAGGGTTA TCGTATAAGT CTGGTGACAG TTATCTTTGT
AGCGTGATGG GCAAGAGTAA CCAAGCCGCG GTGTTTATTG ATTCGACTGG ACGTGCATTT
GCCACCGACA GCCATACGTT GCCTTCAGCG CGAAGCCAAG GCGAGCCTAT CACCACACGC
TTTAATATGG CACCTGGCGC GACGATGCAA CATGTGCTCA TGGGCGAAGA TGAACAGTTC
TTCTTGTTGG CTACCGATGC TGGTTATGGC TTTATTTGTG CTTATCCAGA TTTGGTTAGC
CGTAATAAAG CCGGTAAGGC ACTACTCAGT CTGCCAACCA ATGCGCTTGC TATGCAGCCA
AAGTTAATCA ATAAAACGGC AGATCAGTCG TTGTTAGCGA TTACCTCTGA AGGCCGAATG
TTGATGTTTA GTTTAGATGC CTTGCCACAG TTATCAAAAG GTAAAGGCAA CAAGATTATC
GGTATTCCAA CCGATCGCGC TAAGAATCGT GAAGAGTTAC TTTTGCACTT AAATGTTGTG
CCGCATAATA CCGCAGTAAC TTTGTGGGCT GGTAAGCGCA AGCTAACCTT GAAACCAAGC
GATTTAGAGC ACTATCGTGG TGAGCGTGGT CGTCGTGGTG CTAAGTTACC AAGAGGATTA
CAACGCGTAG ACAGTGTTGA TGTCGAAATG GGACCATTGG CAGAAGACGG CTTGCAAGAC
GATAATCTGG ATATACACGA GTAA
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| Protein sequence | MSDAIELSLD GVEQMPLRRF TEGAYLNYSM YVIMDRALPH IGDGLKPVQR RIIYAMSELG
LSAQSKHKKS ARTVGDVLGK YHPHGDSACY EAMVLMAQPF SYRYPLVDGQ GNWGAPDDPK
SFAAMRYTEA RLSKFSEVLL SELGQGTVDW SPNFDGTMKE PVTLPARLPH ILLNGITGIA
VGMATDIPPH NVHELVGACI ELIDNPKADL ARLMEFVPGP DYPTEAEIIT PRADIERIYD
TGKGSIRARA VYSEEQGEIV ITSLPHQASS GKILEQIANQ MQAKKLPMVS DLRDESDHEN
PVRLVIVPRS NRIDCDQLMT HLFATTDLEK SFRVNLNVLG LDGRPKVKGL KQLLTEWLEF
RLTTVTRRLQ YRLDKVLARL HILEALMVAF LNIDEVIEII RYNDEPKAEL MARFNLSDKQ
AESILELKLR HLAKLEEFKI KGEQDELAAE RDKLELLLSS ERRLKTLVKK ELIQDGETYG
DNRRSPIIER VDAKALTEQE LTPTESVTVV LSDKGWVRCA KGHDVDVEGL SYKSGDSYLC
SVMGKSNQAA VFIDSTGRAF ATDSHTLPSA RSQGEPITTR FNMAPGATMQ HVLMGEDEQF
FLLATDAGYG FICAYPDLVS RNKAGKALLS LPTNALAMQP KLINKTADQS LLAITSEGRM
LMFSLDALPQ LSKGKGNKII GIPTDRAKNR EELLLHLNVV PHNTAVTLWA GKRKLTLKPS
DLEHYRGERG RRGAKLPRGL QRVDSVDVEM GPLAEDGLQD DNLDIHE
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