| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_3323 |
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| Symbol | |
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| ID | 4280225 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 3971281 |
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| End bp | 3972234 |
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| Gene Length | 954 bp |
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| Protein Length | 317 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638136144 |
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| Product | D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding |
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| Protein accession | YP_751998 |
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| Protein GI | 114564484 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.401328 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGCACATA AACTGTTATT ACTGACCAGA GAAAATGACC GATATAGGCA ACTATTAACA
ACGCTTTGCT TGCCGAACCT CGAAATTGTT GACGATCTGA TGGTTGATGA TTCAGACCAT
TATACTGGCG GCAATATTAG CGATACCGAT ATTTGGTTAG CAGAACCTCA TCTAGCCGCT
TCATTATTGC CGCATGTACC GGCGCCCAAC TGGTTACAAT CTACCTTTGC TGGTGTCGAT
GCATTAATGC ATCTGTCGTT ACCACATGAT TATTTACTGA CTAATATTCG CGGTGTGTTT
GGTCCGCTTA TGAGTGAATA TGTTTTTGGT TACCTGCTAA GCCATTATCG CCACCATAAT
GTTTACACTC AACAGCAACA ACAGCAGCGT TGGTTAGCGG GTAGTTATGG TACTTTACAA
GGAGCACAAC TATTAATATT AGGCACCGGA TCTATCGCCC AGCACCTTGC AAAAACAGCT
CATCATTTTG GTATGACCGT CAGCGGGCTT AATCGAAAAG GTGGTCATGT TAGTGAATTT
GATAGCATCG ACACGATGGA TAAATTAGCC GACTATTTAC CGCTAGCAGA TGTGATTGTT
AGCGTATTAC CCAGTACACC TCAAACCAAA CACATTTTAA ATGCGGCTAA TCTTACGTTA
TTAAAAGCAG ATGCCATGTT ATTTAATATT GGCCGAGGTA GCACTATTGA ATTAGAAGCG
CTGCAAGCTG AATTAACCTT ACAGCCACAA CGCCAAGCCA TATTAGATGT ATTTGAACAA
GAGCCCTTTC CTGCTGATCA TCCACTATGG CATTATGATA ACGTCACTAT TACACCGCAT
ATCGCTGCAC CAAGCTTCCC TGAGCAAGTA ATACAGGTAT TCAGTCACAA CTATCAGCTA
TGGCAACAAT CCAAACCATT ACAGTATGTG GTCGACGTTA ACCAAGGTTA CTAA
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| Protein sequence | MAHKLLLLTR ENDRYRQLLT TLCLPNLEIV DDLMVDDSDH YTGGNISDTD IWLAEPHLAA
SLLPHVPAPN WLQSTFAGVD ALMHLSLPHD YLLTNIRGVF GPLMSEYVFG YLLSHYRHHN
VYTQQQQQQR WLAGSYGTLQ GAQLLILGTG SIAQHLAKTA HHFGMTVSGL NRKGGHVSEF
DSIDTMDKLA DYLPLADVIV SVLPSTPQTK HILNAANLTL LKADAMLFNI GRGSTIELEA
LQAELTLQPQ RQAILDVFEQ EPFPADHPLW HYDNVTITPH IAAPSFPEQV IQVFSHNYQL
WQQSKPLQYV VDVNQGY
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