| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_3322 |
|---|
| Symbol | |
|---|
| ID | 4280224 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella frigidimarina NCIMB 400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008345 |
|---|
| Strand | + |
|---|
| Start bp | 3970513 |
|---|
| End bp | 3971247 |
|---|
| Gene Length | 735 bp |
|---|
| Protein Length | 244 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 638136143 |
|---|
| Product | glycerophosphoryl diester phosphodiesterase |
|---|
| Protein accession | YP_751997 |
|---|
| Protein GI | 114564483 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0584] Glycerophosphoryl diester phosphodiesterase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.344899 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTCGTTT TTGCTCACCG CGGCGCCAGC GGTTATACTC CCGAAAACAC CTTAGCCGCA
ATGGACAAAG CCCTCGACTT AGGCGTTAAT GCCATTGAAC TGGATGTGCA TTGCGTTGAA
GGTGAATTAG TGGTGTTTCA TGATCGCCGC TTAGAAGGTA AATCAACAGG AACAGGGCTA
ATTCATTTAG CCACCAAGGC TGCATTGGCT CAATTTACGG TTGGCGGACA AGCAATCCCC
ACATTGTGGC AAGTACTCGA ACGAGTCAGT ATTAGCAGCA AAGGCTCATG TACTATCAAC
ATCGAATTAA AAGGCATTGG CTGTGTACAA CCCTTGATTG CGTTATATCC TCAAGCCTTA
GAGCAACTTA ATTTCACCCC AGAACAACTG TTAATATCAT CCTTTAACCA TCCTTATTTG
GCGCAGATAA AACAGTCTTT TCCGCACGCG GTGATCGCAC CATTACTAGC TGGAATTCCG
CTCGATTTAG CTACAATAAT GACCACACTT AATGCCTATT CAATCAATCT TGATGTTGGT
TTTATTAATC AAGCCATTGT TGATGATGCT CACCAGCGAG GTGGCAAAGT GTTTGTTTAT
ACGGTTGATA ATCCACAAGA TATTCAAGCG TTAAAAGCGA TGGGCGTGGA CGGTATATTC
AGTAATTACC CAGACAAAGC CATCGCAGCA GCAATGATGC CGATAACAAC CGATTATAGT
GGTTGGTTTG AATAA
|
|---|
| Protein sequence | MLVFAHRGAS GYTPENTLAA MDKALDLGVN AIELDVHCVE GELVVFHDRR LEGKSTGTGL
IHLATKAALA QFTVGGQAIP TLWQVLERVS ISSKGSCTIN IELKGIGCVQ PLIALYPQAL
EQLNFTPEQL LISSFNHPYL AQIKQSFPHA VIAPLLAGIP LDLATIMTTL NAYSINLDVG
FINQAIVDDA HQRGGKVFVY TVDNPQDIQA LKAMGVDGIF SNYPDKAIAA AMMPITTDYS
GWFE
|
|---|
| |