Gene Sfri_3313 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_3313 
SymbolmutL 
ID4280215 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand
Start bp3958180 
End bp3960039 
Gene Length1860 bp 
Protein Length619 aa 
Translation table11 
GC content43% 
IMG OID638136131 
ProductDNA mismatch repair protein 
Protein accessionYP_751988 
Protein GI114564474 
COG category[L] Replication, recombination and repair 
COG ID[COG0323] DNA mismatch repair enzyme (predicted ATPase) 
TIGRFAM ID[TIGR00585] DNA mismatch repair protein MutL 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGATTC AGCTGCTACC TCCTCAACTT GCAAACCAAA TCGCAGCCGG TGAGGTCGTT 
GAACGCCCGG CTTCTGTGGT TAAAGAACTG GTTGAAAACA GCCTTGATGC TGGTGCGACT
AGAGTTGATA TCGATATCGA TAAAGGCGGC AGTAAGCTTA TACGTATTCG CGATAATGGT
GCGGGTATTG CTAAAGATGA GTTGGCATTG GCGTTATCGC GTCACGCAAC CTCAAAAGTA
CATACGCTCG ATGACCTAGA AGCTATTTTA AGCTTTGGTT TTCGGGGGGA AGCCTTGGCC
AGTATTAGTT CAGTGTCGCG ATTAACATTA ACTTCGAAAA CCGCTGAGCA ATCTGAAGCT
TGGCAGGCCT ATGCTGAAGG CTCGCAAATG GACGTGAAAG TGACTCCTGC TGCGCATCCA
CAAGGTTCGA CTATTGAAGT GGTTGATTTA TTTTTTAATA CTCCCGCCAG ACGCCGTTTT
TTAAAAAGTG ATAAAACTGA ATTTACTCAT ATTGATGAGT GGTTAAAACG TATAGCCATT
GTTCGTAGCG ATATTCATTT TACCCTGACA CACAACGCTA AGTTAGTGCG TCAGTATCGT
CCTGCAAATA CTGACATTCA AACCCAACAA CGTTTGGCGC AAATTTGCGG TAGAGCGTTT
GCAGATCAAG CATTGAGCAT TGCCTGTGAG CATGATGATT TCGTATTAAC CGGTTATCTG
CAGTCGCCAC AAGACACTGT TATCACTGAC ACCAACTTTT TTTATGTCAA TGGACGATTA
ATTAGAGACC GATTGGTTAA CCATGCCGTA AAACAAGCTT TTGCTGAATA TGGTATTGAG
CATCAGCCGG GCTATGTGTT GATGTTATCA CTTGACCCAC ATCAAGTTGA TGTCAATGTG
CATCCTGCCA AGCATGAAGT GCGGTTTCAT CAATCTCGTT ATGTACACGA CTTTATCCTT
CAAGCTGTGC GCTCGGCATT AGTAGAAATG CCAGCACTAC CTCTGTCTGA TGAATTAGAA
CATCATGATA ATGTTGCCCC AATGCACACA GAATCGAACT TGATGCATGA TGTGAAAGTC
GTCGATACCG CAGAAGATGA ATTTACACTT AATCATGGCT CGAGTAAGGC GATTAACAGC
GTTAGCCAAT TTGGCTCGAT GCATGTCCCT GGAAAGAATA ATGGCTTATC TGGAGGTTAT
TCAGCTGCAA TTAAGCCTAG TTATGATAAA AAGCCTTCTA GTGCATCTTC TGCCCAGACG
AAAACGGCCA TTGCCAATTA TGGGCAATTG TTGCATACCC CGATGAATAG CGCGGTATCC
TATGTTCATG AGGCAGCCCC TCAAGTTACT ATGCCGCCGT TGTTAGCGGG TGAGCATTGG
GTTATCTGTA AAGATGATAA GTTGTCATTA CTGCCAATAA AAAGCGTGTT ATTGGCAGTA
AGAAAGAAAG ATGTTGAAAC CAAATTAGCT AACGGTTTAG TGTCGCAGCC TTTGTTAATG
CCTGTGTCTA TAGCAGCAGA TTTGGATTGG ATAGAAACCT TAGCTGTTCG TGATCAATTA
CTGCGTCAAA TGGGTATTGA GCTAACAATT CGCTTCCAAC AGTTGATTAT TAAAAAAGTG
CCCCCATATT TGAGGGAATG CCAACTTGCA ATTGTGATTC CAGAGTTACT GCAATGGATA
CAATTAGAGC AACCTACCCA GAGCGCCATC GTCGGTTGGC TGGCACAACA AAGTTTATCG
CAATTTGAGC CAGCTCAAGC TTTATGGCTA CAATTTTGTT CACTTGACGA TGAAACACAA
CAAACTTGCT ATGCCCAAGA ACGCATAATA CCTTGGCAAA ATTGGATGAA AGATAATTAA
 
Protein sequence
MAIQLLPPQL ANQIAAGEVV ERPASVVKEL VENSLDAGAT RVDIDIDKGG SKLIRIRDNG 
AGIAKDELAL ALSRHATSKV HTLDDLEAIL SFGFRGEALA SISSVSRLTL TSKTAEQSEA
WQAYAEGSQM DVKVTPAAHP QGSTIEVVDL FFNTPARRRF LKSDKTEFTH IDEWLKRIAI
VRSDIHFTLT HNAKLVRQYR PANTDIQTQQ RLAQICGRAF ADQALSIACE HDDFVLTGYL
QSPQDTVITD TNFFYVNGRL IRDRLVNHAV KQAFAEYGIE HQPGYVLMLS LDPHQVDVNV
HPAKHEVRFH QSRYVHDFIL QAVRSALVEM PALPLSDELE HHDNVAPMHT ESNLMHDVKV
VDTAEDEFTL NHGSSKAINS VSQFGSMHVP GKNNGLSGGY SAAIKPSYDK KPSSASSAQT
KTAIANYGQL LHTPMNSAVS YVHEAAPQVT MPPLLAGEHW VICKDDKLSL LPIKSVLLAV
RKKDVETKLA NGLVSQPLLM PVSIAADLDW IETLAVRDQL LRQMGIELTI RFQQLIIKKV
PPYLRECQLA IVIPELLQWI QLEQPTQSAI VGWLAQQSLS QFEPAQALWL QFCSLDDETQ
QTCYAQERII PWQNWMKDN