Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_3313 |
Symbol | mutL |
ID | 4280215 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | - |
Start bp | 3958180 |
End bp | 3960039 |
Gene Length | 1860 bp |
Protein Length | 619 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 638136131 |
Product | DNA mismatch repair protein |
Protein accession | YP_751988 |
Protein GI | 114564474 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0323] DNA mismatch repair enzyme (predicted ATPase) |
TIGRFAM ID | [TIGR00585] DNA mismatch repair protein MutL |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCGATTC AGCTGCTACC TCCTCAACTT GCAAACCAAA TCGCAGCCGG TGAGGTCGTT GAACGCCCGG CTTCTGTGGT TAAAGAACTG GTTGAAAACA GCCTTGATGC TGGTGCGACT AGAGTTGATA TCGATATCGA TAAAGGCGGC AGTAAGCTTA TACGTATTCG CGATAATGGT GCGGGTATTG CTAAAGATGA GTTGGCATTG GCGTTATCGC GTCACGCAAC CTCAAAAGTA CATACGCTCG ATGACCTAGA AGCTATTTTA AGCTTTGGTT TTCGGGGGGA AGCCTTGGCC AGTATTAGTT CAGTGTCGCG ATTAACATTA ACTTCGAAAA CCGCTGAGCA ATCTGAAGCT TGGCAGGCCT ATGCTGAAGG CTCGCAAATG GACGTGAAAG TGACTCCTGC TGCGCATCCA CAAGGTTCGA CTATTGAAGT GGTTGATTTA TTTTTTAATA CTCCCGCCAG ACGCCGTTTT TTAAAAAGTG ATAAAACTGA ATTTACTCAT ATTGATGAGT GGTTAAAACG TATAGCCATT GTTCGTAGCG ATATTCATTT TACCCTGACA CACAACGCTA AGTTAGTGCG TCAGTATCGT CCTGCAAATA CTGACATTCA AACCCAACAA CGTTTGGCGC AAATTTGCGG TAGAGCGTTT GCAGATCAAG CATTGAGCAT TGCCTGTGAG CATGATGATT TCGTATTAAC CGGTTATCTG CAGTCGCCAC AAGACACTGT TATCACTGAC ACCAACTTTT TTTATGTCAA TGGACGATTA ATTAGAGACC GATTGGTTAA CCATGCCGTA AAACAAGCTT TTGCTGAATA TGGTATTGAG CATCAGCCGG GCTATGTGTT GATGTTATCA CTTGACCCAC ATCAAGTTGA TGTCAATGTG CATCCTGCCA AGCATGAAGT GCGGTTTCAT CAATCTCGTT ATGTACACGA CTTTATCCTT CAAGCTGTGC GCTCGGCATT AGTAGAAATG CCAGCACTAC CTCTGTCTGA TGAATTAGAA CATCATGATA ATGTTGCCCC AATGCACACA GAATCGAACT TGATGCATGA TGTGAAAGTC GTCGATACCG CAGAAGATGA ATTTACACTT AATCATGGCT CGAGTAAGGC GATTAACAGC GTTAGCCAAT TTGGCTCGAT GCATGTCCCT GGAAAGAATA ATGGCTTATC TGGAGGTTAT TCAGCTGCAA TTAAGCCTAG TTATGATAAA AAGCCTTCTA GTGCATCTTC TGCCCAGACG AAAACGGCCA TTGCCAATTA TGGGCAATTG TTGCATACCC CGATGAATAG CGCGGTATCC TATGTTCATG AGGCAGCCCC TCAAGTTACT ATGCCGCCGT TGTTAGCGGG TGAGCATTGG GTTATCTGTA AAGATGATAA GTTGTCATTA CTGCCAATAA AAAGCGTGTT ATTGGCAGTA AGAAAGAAAG ATGTTGAAAC CAAATTAGCT AACGGTTTAG TGTCGCAGCC TTTGTTAATG CCTGTGTCTA TAGCAGCAGA TTTGGATTGG ATAGAAACCT TAGCTGTTCG TGATCAATTA CTGCGTCAAA TGGGTATTGA GCTAACAATT CGCTTCCAAC AGTTGATTAT TAAAAAAGTG CCCCCATATT TGAGGGAATG CCAACTTGCA ATTGTGATTC CAGAGTTACT GCAATGGATA CAATTAGAGC AACCTACCCA GAGCGCCATC GTCGGTTGGC TGGCACAACA AAGTTTATCG CAATTTGAGC CAGCTCAAGC TTTATGGCTA CAATTTTGTT CACTTGACGA TGAAACACAA CAAACTTGCT ATGCCCAAGA ACGCATAATA CCTTGGCAAA ATTGGATGAA AGATAATTAA
|
Protein sequence | MAIQLLPPQL ANQIAAGEVV ERPASVVKEL VENSLDAGAT RVDIDIDKGG SKLIRIRDNG AGIAKDELAL ALSRHATSKV HTLDDLEAIL SFGFRGEALA SISSVSRLTL TSKTAEQSEA WQAYAEGSQM DVKVTPAAHP QGSTIEVVDL FFNTPARRRF LKSDKTEFTH IDEWLKRIAI VRSDIHFTLT HNAKLVRQYR PANTDIQTQQ RLAQICGRAF ADQALSIACE HDDFVLTGYL QSPQDTVITD TNFFYVNGRL IRDRLVNHAV KQAFAEYGIE HQPGYVLMLS LDPHQVDVNV HPAKHEVRFH QSRYVHDFIL QAVRSALVEM PALPLSDELE HHDNVAPMHT ESNLMHDVKV VDTAEDEFTL NHGSSKAINS VSQFGSMHVP GKNNGLSGGY SAAIKPSYDK KPSSASSAQT KTAIANYGQL LHTPMNSAVS YVHEAAPQVT MPPLLAGEHW VICKDDKLSL LPIKSVLLAV RKKDVETKLA NGLVSQPLLM PVSIAADLDW IETLAVRDQL LRQMGIELTI RFQQLIIKKV PPYLRECQLA IVIPELLQWI QLEQPTQSAI VGWLAQQSLS QFEPAQALWL QFCSLDDETQ QTCYAQERII PWQNWMKDN
|
| |