Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_3310 |
Symbol | |
ID | 4280212 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | - |
Start bp | 3955584 |
End bp | 3956891 |
Gene Length | 1308 bp |
Protein Length | 435 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 638136128 |
Product | GTP-binding protein, HSR1-related |
Protein accession | YP_751985 |
Protein GI | 114564471 |
COG category | [R] General function prediction only |
COG ID | [COG2262] GTPases |
TIGRFAM ID | [TIGR03156] GTP-binding protein HflX |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGTTTGATC GTTATGAAGC GGGTGAAACA GCTGTATTGG TTCATATAGA CTTTTCAGAC GAAGAGCGTC GTGAAGATCT AATTGAATTA CAGTTGTTAG TTGAATCTGC TGGTGCTCGC TCTGTTGGAG TGATTACTGG CAGCAGACGC TCGCCGGACC GAAAGTTTTT TATTGGTTCC GGCAAAGCAG AAGAACTTGC TGCTATGGTC GCTGCTACTG AAGCCAATGT AGTGATTTTT AATCATGCAT TAAGTCCTGC TCAAGAACGT AATCTTGAAG TGGTGTGTCA GTGCCGAGTC TTAGATCGAA CTACGTTGAT TCTTGATATT TTTGCTCAAC GAGCGAGAAC TCATGAAGGC AAGATGCAAG TGGAGCTAGC GCAATTGCGC CACATGTCGA CACGCCTAAT TCGTGGTTGG ACTCATTTAG AGCGACAAAA AGGTGGTATC GGGATGCGAG GGCCGGGTGA GACCCAGCTT GAAACAGACC GACGTTTATT ACGAGGCCGG ATCAAGAATA TCAATCGTCG CCTCGACAAA GTAGATAAAC AACGCGAGCA AAGCCGACGA GCTCGTAAGC GCAGTGATTT AGCGACTGTG TCTTTAGTAG GTTATACAAA TGCGGGTAAA TCGACATTAT TTAATGCACT AACGTCATCG GATGTTTATG CTGCTGATCA GTTATTTGCA ACATTAGATC CGACACTGCG TAAATTATCG TTACCTGATG GTGCGGTCAT TTTAGCGGAT ACAGTTGGGT TTATTCGTCA TTTACCTCAT GATCTCGTCG CAGCATTTAA AGCCACATTA CAAGAAACTC GACAAGCTGA AATTCTTTTG CATGTCGTTG ATTGTGCTGA TGACAATATG ACTGAAAATT TTGACCAAGT ACAAAAAGTA TTGGAAGAAA TTGATGCAGA TGAAATCACT CAATTGATTG TATGCAATAA GATAGATTTA CTTGAAGATT TCGCGCCTCG TATCGATTAC GATGAAGACG GTAAACCTGA GAGGGTTTGG GTCTCTGCGC AAAAACGCAT TGGATTTGAT TTGCTGCTGA AAGCGATAAC CGAATTAATC GGTGAAGTGA TTTGCGAGCT TACATTGAAA ATACCTGCAT CAGCAGGACA TTATCTTGGC CAGTTTTATC GACTGGATGC AATACAGCAG AAAGAGTATG ACGATCTGGG GAACTGTATT TTATCTGTTC GTTTATCGGA CGCCAATTGG CGCCGGTTAG CTAAACAGAG TCAGGGGGAA TTAGAGGCAT TTATTTTTGA ACCTTCAGAA GTAGACGTCA CTTGTTAA
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Protein sequence | MFDRYEAGET AVLVHIDFSD EERREDLIEL QLLVESAGAR SVGVITGSRR SPDRKFFIGS GKAEELAAMV AATEANVVIF NHALSPAQER NLEVVCQCRV LDRTTLILDI FAQRARTHEG KMQVELAQLR HMSTRLIRGW THLERQKGGI GMRGPGETQL ETDRRLLRGR IKNINRRLDK VDKQREQSRR ARKRSDLATV SLVGYTNAGK STLFNALTSS DVYAADQLFA TLDPTLRKLS LPDGAVILAD TVGFIRHLPH DLVAAFKATL QETRQAEILL HVVDCADDNM TENFDQVQKV LEEIDADEIT QLIVCNKIDL LEDFAPRIDY DEDGKPERVW VSAQKRIGFD LLLKAITELI GEVICELTLK IPASAGHYLG QFYRLDAIQQ KEYDDLGNCI LSVRLSDANW RRLAKQSQGE LEAFIFEPSE VDVTC
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