Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_3309 |
Symbol | |
ID | 4280211 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | - |
Start bp | 3954390 |
End bp | 3955550 |
Gene Length | 1161 bp |
Protein Length | 386 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 638136127 |
Product | HflK protein |
Protein accession | YP_751984 |
Protein GI | 114564470 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0330] Membrane protease subunits, stomatin/prohibitin homologs |
TIGRFAM ID | [TIGR01933] HflK protein |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTTGGA ATGAGCCCGG TAACAAGGGA AACAAAGACC CTTGGGGAAA TAAAGGTGGT AACGATAAAG GGCCACCAGA TCTTGACGAA GTATTTCGTA ACCTATCAAA ACGCTTTGGT GGCAAGGGGG GCGGTAGCGC CACTGGTCAG CCATTTAATT CATCTTTACT GATTGTAATT GCCTTGATTG CCTTAGTTAT TTGGGCATTG TCTGGCTTAT ATACGGTCAA AGAAGCTGAG CGTGGAGTGT TACTCCGTTT TGGTCAACAC ATCGGTGAAG TGAGTTCCGG TTTACATTGG AAAGCCACTT TTATTGACGA AGTGACAATG GTTGATGTGG AAACGTTCCG TTCGATTCCT GCGTCTGGCA GAATGCTGAC ATCTGATGAA AACATCGTGA ATGTTGAACT TGTGGTTCAA TACAGCGTAT CAGATGCTTA TTCATATCTG TACAGTGCTG TTGATGCCAA TTCGAGTTTA CGTGAAGCGA CAGATAGTGC GTTACGTTAT GTCATTGGTC ATAATCGTAT GGATGACATT TTAACCACTG GTCGTGATGC TATTCGTCGT GACACTTGGA CTGAGTTAGA GCGTATTATT GAACCGTATA AACTAGGCTT ACAAATTCGT GACGTTAACT TTTTACCAGC TCGTCCTCCT GAAGAAGTCA AAGATGCATT TGATGATGCA ATCTCTGCTC AGGAAGATGA ACAGCGTTTT ATTCGCGAAG CTGAAGCTTA TGCTCGTGAA ATCGAACCTA AAGCGCGTGG TACTGTCGAA CGTATGGCAC AACAAGCTAG TGCTTACAAA GAGCGTGAAG TTCTTGAAGC TAGAGGTAAA GTCGCTCGAT TTGAGAAGTT ATTACCTGAG TATAAAGCTG CTCCAGGTGT AACCCGAAAT CGTTTATACA TTGATGCGAT GCAATCTGTG TTGGCTGATA CTAATAAAGT ACTTATCGAC ACTAAGAATA GCGGCAATCT GATGTATTTA CCTTTGGATA AGTTGATGGA TTCTTCTAAG AGTCTGCGCA ATCAAGTAGA ACCTGAGGTC GAACGTCACA TCAATTCTGT TTCTAGTAGT GGTGTTGATA CGCCGATTAC TAGCATGCCG ACTGATGGTC GTCTCAGCCG CGAAGATCGT ATTCGCCAAG GGAGGAACTA A
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Protein sequence | MAWNEPGNKG NKDPWGNKGG NDKGPPDLDE VFRNLSKRFG GKGGGSATGQ PFNSSLLIVI ALIALVIWAL SGLYTVKEAE RGVLLRFGQH IGEVSSGLHW KATFIDEVTM VDVETFRSIP ASGRMLTSDE NIVNVELVVQ YSVSDAYSYL YSAVDANSSL REATDSALRY VIGHNRMDDI LTTGRDAIRR DTWTELERII EPYKLGLQIR DVNFLPARPP EEVKDAFDDA ISAQEDEQRF IREAEAYARE IEPKARGTVE RMAQQASAYK EREVLEARGK VARFEKLLPE YKAAPGVTRN RLYIDAMQSV LADTNKVLID TKNSGNLMYL PLDKLMDSSK SLRNQVEPEV ERHINSVSSS GVDTPITSMP TDGRLSREDR IRQGRN
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