Gene Sfri_3304 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_3304 
SymbolsspA 
ID4280206 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand- 
Start bp3949832 
End bp3950461 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content43% 
IMG OID638136122 
Productstringent starvation protein A 
Protein accessionYP_751979 
Protein GI114564465 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0625] Glutathione S-transferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTGTTG CTGCCAACAA GCGCTCTATC ATGACACTTT TTTCTGGTGC CGATGATTTA 
TATAGTCACC AAGTACGTAT CGTATTGGCT GAAAAAGGGG TTACCGTTGA TGTTTTACAG 
GTAGACCCAA GTGAAATGCC TGAAGATTTA CTTGAAGTAA ATCCATACAA CTCTGTACCG 
ACTTTAGTTG ATCGTGAACT AGTGTTGTAC GAATCACGCA TTATTATGGA ATATTTGGAT 
GAGCGTTTTC CACATCCTCC ATTAATGCCT GTATATCCGG TATCTCGCGG CCAAAGCCGT 
TTAATGATGC ACAGAATCGA CACCGATTGG TATGCGCTTG TAGAGCGTAT CCGTAAAGGT 
GAAAAGGCTG ATGCAGCGCG TAAAGAGTTA ATGGAAAGCT TAATTGCTTT AGCGCCAGTA 
TTTGCTGAAA TGCCATACTT CATGAGCGAA GAGTTTGGTT TATCTGATTG CTACTTAGGC 
CCATTATTGT GGCGTCTACC AGTATTAGGC ATTCACTTAG ACCCACGTAC ATCGAAAGAT 
ATCAGTGCTT ACATGACACG TATTTTTGAA CGTGAATCAT TTAAGGCATC GTTAACTGAG 
GCTGAGCGCG AAATGCGCAT GGGCATGTAA
 
Protein sequence
MAVAANKRSI MTLFSGADDL YSHQVRIVLA EKGVTVDVLQ VDPSEMPEDL LEVNPYNSVP 
TLVDRELVLY ESRIIMEYLD ERFPHPPLMP VYPVSRGQSR LMMHRIDTDW YALVERIRKG 
EKADAARKEL MESLIALAPV FAEMPYFMSE EFGLSDCYLG PLLWRLPVLG IHLDPRTSKD 
ISAYMTRIFE RESFKASLTE AEREMRMGM