Gene Sfri_3302 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_3302 
Symbol 
ID4280204 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand
Start bp3948695 
End bp3949264 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content39% 
IMG OID638136120 
Productglutamine amidotransferase of anthranilate synthase 
Protein accessionYP_751977 
Protein GI114564463 
COG category[E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism 
COG ID[COG0512] Anthranilate/para-aminobenzoate synthases component II 
TIGRFAM ID[TIGR00566] glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTGTTGA TGATTGATAA TTATGATTCT TTTACGTTTA ACTTAGTTCA GTACTTCCAA 
GCTCTGGGGC AAGAGATACT GGTTAAACGT AATGATGAAA TCAGCATTGA ACAAATTGAA
GCTTTAGCAC CTACACATTT GATTATTTCT CCTGGTCCAT GCACTCCTAA TGAAGCGGGT
ATTTCACTTG CAGCTATTAA ACATTTTGCC GGTAAAATTC CTATTCTTGG TGTGTGTTTA
GGACATCAAG CTATCGCACA AGTGTTTGGT GTTGATGTTG TGCGTGCCAA ACGTGTTATG
CACGGTAAAA CCAGCTTGAT TGAACATAAT CAACAGGGAT TATTCCGTCA ATTAGCATTA
CCTCTGCAGG TTACTCGTTA TCATTCATTG TTGATTAACC ATGTACCTCA TGGCTTTAGT
CTGGATGCGT GGTTTGATGA CCCAATTTAT GGCCGTGAAA TTATGGCGAT GAGCCATGAC
GCGTTACGTA TTTACAGCGT CCAGTTTCAT CCTGAATCTA TTTTGACTCA GCAAGGCCAT
GAACTTTTGG ATAACTTTTT GTATTTATAA
 
Protein sequence
MLLMIDNYDS FTFNLVQYFQ ALGQEILVKR NDEISIEQIE ALAPTHLIIS PGPCTPNEAG 
ISLAAIKHFA GKIPILGVCL GHQAIAQVFG VDVVRAKRVM HGKTSLIEHN QQGLFRQLAL
PLQVTRYHSL LINHVPHGFS LDAWFDDPIY GREIMAMSHD ALRIYSVQFH PESILTQQGH
ELLDNFLYL