| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_3297 |
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| Symbol | astD |
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| ID | 4280199 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 3940672 |
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| End bp | 3942132 |
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| Gene Length | 1461 bp |
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| Protein Length | 486 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638136115 |
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| Product | succinylglutamic semialdehyde dehydrogenase |
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| Protein accession | YP_751972 |
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| Protein GI | 114564458 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
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| TIGRFAM ID | [TIGR03240] succinylglutamic semialdehyde dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACACAAT ATATTCAAGG TCAGTGGTTA GCTGGCGAAG GTCATGAAAT CAATTCGAAA
AACCCTGCCA ACGGTGACGT AATTTGGCAA GGTAACACGG CTACTGCTAC TCAAGTGAAT
GCAGCTGTAG ATGCCGCTCG TGCGGCACAG TTTGATTGGT TTATGCTGGG TTATGAAGCT
CGCTTAGCCA TAGTCGAAGC GTATCGTGCA CAACTAGAAG CTAATAAAGC CGAGATCGCA
GAAACCATCG CTCAAGAAAC CGGTAAGCCA CAGTGGGAAA CTGCCACTGA AGTGGGCGCT
ATGATTGGCA AGATAGCATT GTCGGCAAAA GCCCATGACA AACGTACCGG CACTGAAACC
AATGATTTAC CTGCAGGGCG TGCCGTATTA CGTCACAAGC CTCATGGTGT TGTAGCGGTA
TTTGGCCCTT ATAATTTCCC AGGCCATCTA CCAAACGGAC ACATAGTACC AGCATTATTG
GCCGGTAACA CAGTGGTGTT TAAGCCATCA GAATTAACGC CTAAAGTGGC TGAGTTAATG
CTGAAGTGTT GGGACAAAGC TGGTTTACCA CAAGGTGTGG TTAACTTAGT GCAAGGTGAA
GTTGAAACCG GTAAAGCGTT AGCATCACAT CCACAAATTG ACGGTTTATT CTTTACCGGT
AGTTCACGTA CTGGGCATAT TTTACATGAA CAATATGCTG GCCTCCCAGG TAAGATTTTA
GCCTTAGAAA TGGGCGGTAA TAATCCGCTT ATCGTTAAAG GCGTTACCGA TACCAAAGCT
GCGGTCCATG ACATTATTCA GTCTGCTTAT ATTTCGTCTG GCCAGCGTTG TACTTGTGCC
CGTCGTTTAT ATATTGAAGA GGGCGCACAA GGTGATGCGT TAATCGCAGA GCTAGTAAAG
GCTATTAAGC AAATTAAAGT GGGTGCTTGG AACGTTCAAC CACAACCTTT TATGGGCTCG
ATGATTTCTG AAACCGCTGC ACGTGGCATG GTTGCCGCAC AGGCGACACT TCAGTCATTA
GGTGGTGTTT CATTAGTTGA GTTAGTGCAA GTTGAAGCTG GTACTGGTTT AGTCACTCCA
GGCTTAATAG ATGTCACTAA AGTCGCTGAG TTACCTGATG AAGAATATTT CGGTCCATTA
TTGCAATTAG TACGTTACAG CGATTTTGAC CAAGCTATTC ATTTAGCCAA TGCGACTCGT
TATGGTTTAT CAGCTGGTTT ATTAGCGGAT AGCCGTGAAG ATTACGATTA CTTTTTAGCG
CGCATTCGTG CTGGTATTGT TAATTGGAAT AAGCAGATTA CAGGCGCATC AGGTGCGGCA
CCATTTGGTG GCGTTGGCGC TTCAGGTAAT CATCGTGCAA GTGCATTTTA TGCTGCTGAT
TACTGTGCTT ACCCTGTCGC TTCAATGGAA GCAGATGCCG TAAGCTTACC TGCTACTTTA
AGCCCTGGTT TATCAATTTA A
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| Protein sequence | MTQYIQGQWL AGEGHEINSK NPANGDVIWQ GNTATATQVN AAVDAARAAQ FDWFMLGYEA
RLAIVEAYRA QLEANKAEIA ETIAQETGKP QWETATEVGA MIGKIALSAK AHDKRTGTET
NDLPAGRAVL RHKPHGVVAV FGPYNFPGHL PNGHIVPALL AGNTVVFKPS ELTPKVAELM
LKCWDKAGLP QGVVNLVQGE VETGKALASH PQIDGLFFTG SSRTGHILHE QYAGLPGKIL
ALEMGGNNPL IVKGVTDTKA AVHDIIQSAY ISSGQRCTCA RRLYIEEGAQ GDALIAELVK
AIKQIKVGAW NVQPQPFMGS MISETAARGM VAAQATLQSL GGVSLVELVQ VEAGTGLVTP
GLIDVTKVAE LPDEEYFGPL LQLVRYSDFD QAIHLANATR YGLSAGLLAD SREDYDYFLA
RIRAGIVNWN KQITGASGAA PFGGVGASGN HRASAFYAAD YCAYPVASME ADAVSLPATL
SPGLSI
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