| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_3296 |
|---|
| Symbol | |
|---|
| ID | 4280198 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella frigidimarina NCIMB 400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008345 |
|---|
| Strand | - |
|---|
| Start bp | 3939802 |
|---|
| End bp | 3940602 |
|---|
| Gene Length | 801 bp |
|---|
| Protein Length | 266 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 638136114 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_751971 |
|---|
| Protein GI | 114564457 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.0989323 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCATACTG ACGTTAATGC TTTATTTGCT GCCTTGTGGC AAGACTACAT TAAGATGACG
CCTTCAGCGG CGAAAATTCA TCAGCTTTTA GGCCATGGCG CGCCAATCAT CAATGACCAT
ATCGCTTTGC GTACTTTTAA TATCGCTAAA GTAAATTTAA GCGTATTGGC TAAACATTTC
ACCTCTATCG GTTATGTCGA CAGTGGTGAT TATAAGTTTG AGCAGAAAAA GCTGATAGCT
AAGCACTTTG AACATCCGGA TCCAAAACAG CCAAAGGTGT TTATCTCTGA GTTGTTAGTT
GAAGAATTTA GCCCTGAGGT GCAAAAGAGC ATCCATGGTT TAATCGATCA GGTTGATATT
GCGGCAACCA CGGCAGATAA CTTCATATAT TCTGGTCGTC ATTGGGATGT AGATAAAGCG
ACTTACCAAG CATTACTTGC TGAAAGCGAA TATGCTGCGT GGGTTGCTGC GTTAGGTTAC
CGTGCCAATC ACTTTACGGT TTCAATTAAC GATCTGCCTG AATTTGAGCG TATTGAAGAT
GTAAACCAAG CCTTAAAGCA GGCTGGGTTT GTGTTAAATA GCTCTGGCGG TGAAGTTAAA
GGATCGCCAG AAGTCTTGTT AGAGCAGTCT TCTACCATGG CTGATAAAGT GGTTGTGAAC
TTTACCGATG GCGATGTGGA AATTCCAAGT TGTTTCTATG AATTTGCCCG TCGTTATCCA
ATGGCTAATG GTCAGCTTTA TACTGGCTTT GTTGCAGCAT CTGCCGACAA GATTTTTGAA
AGTACCAATG CAATGATGTA A
|
|---|
| Protein sequence | MHTDVNALFA ALWQDYIKMT PSAAKIHQLL GHGAPIINDH IALRTFNIAK VNLSVLAKHF
TSIGYVDSGD YKFEQKKLIA KHFEHPDPKQ PKVFISELLV EEFSPEVQKS IHGLIDQVDI
AATTADNFIY SGRHWDVDKA TYQALLAESE YAAWVAALGY RANHFTVSIN DLPEFERIED
VNQALKQAGF VLNSSGGEVK GSPEVLLEQS STMADKVVVN FTDGDVEIPS CFYEFARRYP
MANGQLYTGF VAASADKIFE STNAMM
|
|---|
| |