| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_3291 |
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| Symbol | |
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| ID | 4280193 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 3935544 |
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| End bp | 3936323 |
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| Gene Length | 780 bp |
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| Protein Length | 259 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638136109 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_751966 |
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| Protein GI | 114564452 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0790] FOG: TPR repeat, SEL1 subfamily |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.107014 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAAAAAAC TGAGTCAAAT CGGGTTTATT GCCTGTGTTG TTTTATTAAG TGGACTTAGT
TCATCTGTAA AAGCGTTTGT TATCCCGCCC TCTATTGAGT CTCAGGCGGC GACTAAGTTG
GTTCATATTC AGATTAAAGC CAAACAGGGC AATGCAGATG CACAATTTTT ATTGGGTTTA
ATGAACCTTT CCGGACGATT TGTTACTCAA GATACTAAGC AAGGATTAAG CTGGGTTAAT
CTTGCTGCAC AACAACACAA TATTAAGGCG CAACAAACAT TAGCTGATTT AGCCTTTGAC
GGTAAATTAA TTCCGCGTGA TTTAGCGCTG GCAGAAAAAT GGTATCTGCA AATGGTCGCA
CAAGGAGATA AGTGGGCTCA TTTTCGTTTA GGGTTTATTT ATTCTGCTGG TGGTGATGGT
GTTGTGCGTA ATTGCGGCAA AGCAATGGAG CAGTTTAGTG CTGCGGGGGA TGCCGTTTCA
ATGGGCAATA TTGCGTGGAT ATTAGCCACG TGCCCTGAGG CCGAATACCG AGATGGTTCG
CGTGCAGTAT CAATGTCGTT AAAATTACTC GAACAAAATC AGAATGATCC AACGGTATTA
GATAATCTTG CGGCCGCGTA TGCTGAGCTT GGTGATTTTT CTGCGGCAAT TGATACCCAG
AAAAAAGCAA TTGATGCGTT AAAGGATAAT CCTGAGATTG TGCGCAGCGA TGAGTTTATT
TTACGTTTGA AACAGTATCA GAATAATCAA GCTTATCGAG AAATTATCCC ACTGATGTAA
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| Protein sequence | MKKLSQIGFI ACVVLLSGLS SSVKAFVIPP SIESQAATKL VHIQIKAKQG NADAQFLLGL
MNLSGRFVTQ DTKQGLSWVN LAAQQHNIKA QQTLADLAFD GKLIPRDLAL AEKWYLQMVA
QGDKWAHFRL GFIYSAGGDG VVRNCGKAME QFSAAGDAVS MGNIAWILAT CPEAEYRDGS
RAVSMSLKLL EQNQNDPTVL DNLAAAYAEL GDFSAAIDTQ KKAIDALKDN PEIVRSDEFI
LRLKQYQNNQ AYREIIPLM
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