Gene Sfri_3285 details

Gene Information

• Locus tag: Sfri_3285
• ID: 4280187
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella frigidimarina NCIMB 400
• Kingdom: Bacteria
• Replicon accession: NC_008345
• Strand: +
• Start bp: 3930198
• End bp: 3930689
• Gene Length: 492 bp
• Protein Length: 163 aa
• Translation table: 11
• GC content: 37%
• IMG OID: 638136103
• Product: hypothetical protein
• Protein accession: YP_751960
• Protein GI: 114564446
• COG category: [S] Function unknown
• COG ID: [COG5589] Uncharacterized conserved protein
• TIGRFAM ID: [TIGR02444] conserved hypothetical protein TIGR02444

Plasmid Coverage information

• Num covering plasmid clones: 29
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCGCGGC CTTCTCACCA CCAAACATTC AGCTATTTAA TTTGGCGTGA TTGCGAACAA 
AACTATTCAA TTAATCCTAA ATTTTACATA AGCTTACAAG ATAGTTACCA AGTAAATGTT 
AACCTTTTAC TATTAGCTCA ATTCCTAGAT CAACAACATT ATGTGTTAAC CCAGCAGCAG 
TGGGAATTAT TAACGGGTGC TATAGAACAA TGGGAAGAAA ATGTGTTGCA ACCTTATCGA 
CGATTACGTC GGATTGCTAA AGTACACTTA GACAGTGAAG AATATCAAAA AATGCTCGAC 
GTAGAGCTAA TTATGGAACG TAAATCTCAG TACATGTTAT TGCATAAATT GAACTTGCTG 
CAGAGGACAA CGTTAGATAC TGAGCCTGAT AATACTGAGC CGAGTAATAT ACAACACTAT 
CTTAGCTTAT TTGGCTTAGA TGGAAGCATT ATGGCTGAAT TAACCACCCA AGTAGGTTTG 
ACTAACTCGT AA 

 

Protein sequence

MSRPSHHQTF SYLIWRDCEQ NYSINPKFYI SLQDSYQVNV NLLLLAQFLD QQHYVLTQQQ 
WELLTGAIEQ WEENVLQPYR RLRRIAKVHL DSEEYQKMLD VELIMERKSQ YMLLHKLNLL 
QRTTLDTEPD NTEPSNIQHY LSLFGLDGSI MAELTTQVGL TNS