| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_3284 |
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| Symbol | |
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| ID | 4280186 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 3928215 |
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| End bp | 3930125 |
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| Gene Length | 1911 bp |
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| Protein Length | 636 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638136102 |
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| Product | ABC transporter related |
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| Protein accession | YP_751959 |
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| Protein GI | 114564445 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0488] ATPase components of ABC transporters with duplicated ATPase domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCAACA TAAGCCAAGC TCAGTTAATT CGCGGCAGTA AAACCTTACT CGATGAAACC
TCACTGACGA TTTATCCCGG ACACAAGGTT GGCCTTGTCG GCGCCAACGG TACAGGTAAA
TCATCATTGC TTGCCTTGAT TTTAGGTCAT TTACATCTAG ATAAAGGTGA GTTTAGTTTC
CCCTCAGGTT GGCAAGTTGC CTCTGTTGCG CAGGAAACTC CGGCATTAGA TGTGTCGGCA
CTTGAGTATG TCCTCGACGG TGACACCGAA TACCGAGATT TAGAAGCCCA ACTAGAGAAA
GCTCAAACCG ACAATAATGG TAATGCCATT GCGCTTATTC ATGGCAAAAT TGATGCAATT
GGCGGCTATG CCATTAAAGC GCGAGCAGGC GCGCTATTAG CAGGCTTAGG ATTTAAGGAT
GCAGACCAAA GTAACCCGGT AAAAAGCTTC TCTGGTGGTT GGCGTATGCG TCTCAACTTA
GCCCAAGCAC TCTTATGTCG TTCAGACTTA TTGTTACTCG ATGAGCCAAC CAACCACTTA
GACCTAGACA CCATGTATTG GTTAGAAGGT TGGATAAAAT CTTATCAAGG GACACTCATT
TTGATCAGCC ACGATCGTGA CTTTATCGAT GGCATTGTTG GTGAAATTGT TCATGTTGAA
AATCACAAAT TAAATTACTA CAAAGGTAAT TACTCTTCTT TTGAACGAGT GCGCGCTGAA
CGCATGGCCC AGCAGCAAGT AGCCTTTGAG CGTCAGCAAA AAGAGCGCTC GCATATGCAG
TCATTTGTTG ATCGGTTTCG CTATAAAGCC AGTAAAGCTA AACAAGCACA AAGCCGCTTG
AAAGCACTCG AGCGCATGGC CGAGTTGCTG CCATCGCAAG TAGACAATCC ATTTCAAATG
GCCTTTAGAG AACCAGAAGC GCTACCGAAC CCATTAGTGG TAATGGAAAA TGTCTCTATT
GGTTATGAAG ATAATACCAT CCTGAAACAG GTTGAGTTAA ATCTCGTTCC TGGTGCGCGT
ATTGGTTTGT TGGGTAGAAA TGGTGCCGGT AAATCAACGC TGATCAAACT GTTATCAGGC
CAACTACAAG CCAAAACGGG TAAGTATCAA CCTAACCCAG GATTAAATAT TGGTTATTTT
GCTCAGCATC AAGTTGAATT TTTAACGCTT GATGATTCTC CAATGCAACA CTTGGCTAGA
CTCGCGCCAG CAAGTGTTCG CGAACAAGAA TTACGTAACT TTTTAGGTGG GTTTGGCTTT
AATGGTGATA TGGCCTTATC GCCAGTACGG CCGTTTTCTG GCGGCGAAAA AGCCCGCCTA
GTATTAGCAT TAGTGGTTTG GCAGCGTCCA AATTTACTAT TACTCGATGA ACCGACCAAC
CATTTAGATT TAGAGATGCG TCACGCACTC ACCATGGCAT TGCAAACCTT TGAGGGCGCA
ATGGTTATCG TGTCACACGA TCGTCACCTA TTACGATTAA GTTGTAGTGA TTATTACTTA
GTTGACCAAG GTGTTGTAAC ACCTTTTGAT GGCGACTTAG ATGACTACCA TCAATGGTTG
CTAGATGCCG CTAAACTAGC ACAAGCCAAC AACAAAACAG ATGTAGGCGC TAGCAGCGAT
GCTGTTGATA AAAAACAGCA AAAAAGAATG GAAGCTGAAT TACGTCAGAA AGTATCGCCG
CTGAAAAAAC AACAAGTAAA GTTAGAAACT CAACAGCAAA AAATTAATGC CCGATTAGCC
GAATTAGAAA TTGAGTTAGC CGATGGCAGC TTATACGAAA CAGAGAACAA AGCTAAAATG
ACCAATGTTC TCAACGAACG GACTACGCTG ACTCAAGCTA TGGATGAAAG TGAAATGCAT
TGGTTAGAGA TTCAAGAGCA GATCGATATT TTTGAGCAAG ATTGCCTATA A
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| Protein sequence | MINISQAQLI RGSKTLLDET SLTIYPGHKV GLVGANGTGK SSLLALILGH LHLDKGEFSF
PSGWQVASVA QETPALDVSA LEYVLDGDTE YRDLEAQLEK AQTDNNGNAI ALIHGKIDAI
GGYAIKARAG ALLAGLGFKD ADQSNPVKSF SGGWRMRLNL AQALLCRSDL LLLDEPTNHL
DLDTMYWLEG WIKSYQGTLI LISHDRDFID GIVGEIVHVE NHKLNYYKGN YSSFERVRAE
RMAQQQVAFE RQQKERSHMQ SFVDRFRYKA SKAKQAQSRL KALERMAELL PSQVDNPFQM
AFREPEALPN PLVVMENVSI GYEDNTILKQ VELNLVPGAR IGLLGRNGAG KSTLIKLLSG
QLQAKTGKYQ PNPGLNIGYF AQHQVEFLTL DDSPMQHLAR LAPASVREQE LRNFLGGFGF
NGDMALSPVR PFSGGEKARL VLALVVWQRP NLLLLDEPTN HLDLEMRHAL TMALQTFEGA
MVIVSHDRHL LRLSCSDYYL VDQGVVTPFD GDLDDYHQWL LDAAKLAQAN NKTDVGASSD
AVDKKQQKRM EAELRQKVSP LKKQQVKLET QQQKINARLA ELEIELADGS LYETENKAKM
TNVLNERTTL TQAMDESEMH WLEIQEQIDI FEQDCL
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