| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_3278 |
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| Symbol | |
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| ID | 4280180 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 3923284 |
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| End bp | 3924345 |
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| Gene Length | 1062 bp |
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| Protein Length | 353 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638136096 |
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| Product | poly(A) polymerase |
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| Protein accession | YP_751953 |
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| Protein GI | 114564439 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0617] tRNA nucleotidyltransferase/poly(A) polymerase |
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| TIGRFAM ID | [TIGR01942] poly(A) polymerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00466966 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTTTGGTC GTGATGTCAT TGAGGTTGCC ACTTTCCGCG GTCACCACAG TGAAAGCAAT
GATAAAGTGT CCAAATCCAA CGCTGAAGGT CGTCTATTAC GCGATAACGT CTACGGTGAG
ATTGATGAAG ATGCTGAACG CCGTGACTTC ACCATTAACG CGCTCTACTA CGACATCAGT
GATTATTCTA TTCGCAGCTA TGGTGGTGGA ATAAACGATC TCAATGCTAG AACGATTAAG
CTTATTGGCG ATCCAGATAC GCGTTACCGC GAAGACCCAG TGCGTATGCT TCGTGCAGTT
CGTTTTGCAA CGAAACTTGA TATGCAAATC GATGCAGTGA CAGCGGATCC CATCAAAGCC
CTTGCTCCAT TGCTAGCCGA TATTCCTGCT GCGCGCATGT ATGAAGAAGT ATTAAAACTG
TTTTTTGCTG GTAAAGCAGA AGCCAATTAC AACATGATGC AACGTTTTGG TTTATTCGCG
CCCTTGTTCC CACAAGTCGG TGCATTAATT GAAGAGTCGC CTAAAGGGCA TGCCGCTAAA
ATGCTGCAAG TCGTTATGCG TAATACCGAT ATTCGTGTTA GCGAAGATAA AACCGTGACT
CCGGCATTTT TCTTTGCGGC AATCTTATGG TATCCCGTTA AGCAACGAGC TGATGATATT
GCCATTGAAA GCGGCTTAAC TCATTACGAT GCATATGTTG CTGCAATGGG TGATGTGCTT
GAAAAACAGT GCCTAACAAT TAGTTTACCT CGCCGATTTA GCACTCCTGC ACGCGACATT
TGGCAATTGC AGTTACGATT AGAGCGTGGT CAAGGCACTC GAGCATTTAA ACTGCTAGAG
CATCCTAAGT TCAGAGCAGC TTATGATTTA CTGCTACTGC GCGGTGAAGT TGAAATGGGT
AATATTGCCA AAATAGCTGA GTGGTGGAAG GCATTTGTAG AAGCCGATGA AACTGACCGT
AGCGATATAG CTAAAAGCAT CAAAGGCAGT AATAGTCGCA ACAGAAATGC ACCACAGCGT
AAACGTCGCC GTAAACCAGC AGCCAAGCCT GCGGAAGAAT AA
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| Protein sequence | MFGRDVIEVA TFRGHHSESN DKVSKSNAEG RLLRDNVYGE IDEDAERRDF TINALYYDIS
DYSIRSYGGG INDLNARTIK LIGDPDTRYR EDPVRMLRAV RFATKLDMQI DAVTADPIKA
LAPLLADIPA ARMYEEVLKL FFAGKAEANY NMMQRFGLFA PLFPQVGALI EESPKGHAAK
MLQVVMRNTD IRVSEDKTVT PAFFFAAILW YPVKQRADDI AIESGLTHYD AYVAAMGDVL
EKQCLTISLP RRFSTPARDI WQLQLRLERG QGTRAFKLLE HPKFRAAYDL LLLRGEVEMG
NIAKIAEWWK AFVEADETDR SDIAKSIKGS NSRNRNAPQR KRRRKPAAKP AEE
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