| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_3275 |
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| Symbol | |
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| ID | 4280177 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 3920514 |
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| End bp | 3921218 |
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| Gene Length | 705 bp |
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| Protein Length | 234 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638136093 |
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| Product | sugar fermentation stimulation protein A |
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| Protein accession | YP_751950 |
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| Protein GI | 114564436 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1489] DNA-binding protein, stimulates sugar fermentation |
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| TIGRFAM ID | [TIGR00230] sugar fermentation stimulation protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0000414007 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAATTTA CTCCCGAATT AGAGTCCGGT GTATTAATTA AACGATACAA ACGCTTTCTT
GCCGATATCA TGCTACCTAA CGGGCAAGAA ATCACTATTC ATTGCCCAAA TACTGGTTCA
ATGAAAAATT GCTTATTCCC TGGTGAAAAG GTGTGGTTTT CCACCTCCGA CAATCCAAAA
CGAAAATATG CCCACACATG GGAACTAATG CAGACAGATC AGCAGCATTA TATCGGGATT
AATACCGGAC GAGCCAATGC TCTTGCAGAA GAAGCGATTA ATCGGCAAGT GATTACCGAA
CTGTTAGGTT ACGAGCATTT AAAACGTGAA GTGAAGTACG GCAGTGAAAA TAGCCGCATC
GATATCTTGC TCACTAGCCA AAACCGACCT GAGTGCTATA TTGAAGTGAA GAGCTGTACT
TTGCTAGAAG ATCAAATGGG TTACTTCCCA GATGCTGTAA CCACGCGTGG ACAGAAGCAT
CTGCGAGAAT TAATCCACAT GGTGGAATTA GGCCATCGTG CGGTTTTATT ATTTGTGGTG
CAGCACAGTG CCATCACGAG TGTTAAACCC GCGCGACACA TAGATCCACA TTACGCAGAC
TTACTTGAAC AAGCCGTAGC AAATGGCGTT GAAGTGCTAG CTTACAAAAC AGCGCTTTCG
CCACAGGGAA GCCTGATCAC TTCAGCTTGT AAAGTCATGC TGTAG
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| Protein sequence | MKFTPELESG VLIKRYKRFL ADIMLPNGQE ITIHCPNTGS MKNCLFPGEK VWFSTSDNPK
RKYAHTWELM QTDQQHYIGI NTGRANALAE EAINRQVITE LLGYEHLKRE VKYGSENSRI
DILLTSQNRP ECYIEVKSCT LLEDQMGYFP DAVTTRGQKH LRELIHMVEL GHRAVLLFVV
QHSAITSVKP ARHIDPHYAD LLEQAVANGV EVLAYKTALS PQGSLITSAC KVML
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