| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_3271 |
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| Symbol | |
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| ID | 4280173 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 3913289 |
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| End bp | 3915835 |
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| Gene Length | 2547 bp |
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| Protein Length | 848 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638136089 |
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| Product | ATP-dependent helicase HrpB |
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| Protein accession | YP_751946 |
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| Protein GI | 114564432 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1643] HrpA-like helicases |
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| TIGRFAM ID | [TIGR01970] ATP-dependent helicase HrpB |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCACGA CATTGCCGAT TCACGCGGTA CTCGACTCGT TGCGTGTGCA GTTTTCGGCC
CATTCACACA TCATTATCGA AGCGCCAACC GGTGCAGGTA AATCCACTGC ATTACCATTA
GCGATGTTAG CCTGGCCCGA AATTCGTGGC AAAATTCTGA TGTTAGAACC CCGTCGAGTC
GCCGCCCGCA ATGTCGCCAA GTTTATTGCC CAACAATTGG GCCAAAATGT TGGCCAGCAA
GTGGGTTATC GTGTTCGCGG TGAGTCAAAA GTCAGTGCAG ATACTCGATT AGAAATTGTC
ACCGAAGGTA TTCTGACCCG CATGATCCAA CAAGACCCTG AGCTTAGTGG GATTGATGTG
ATTATTTTTG ATGAAATACA TGAACGTCAT CTTACGACTG ATTTAGGCTT GGCTTTAGCA
TTGGAAGTGC AGCAATCATT ACGTGACGAT TTACACATTA TTGCTATGTC TGCCACCTTG
TCTGGCTTAC CGCTAGACAC GTTAATGCCC GATGCTGCGC AAATACACAG TGATGGCCGC
AGTTTTGAGG TTGAGATTGC TTATCAGCCT TGCCCTGGAC AACAGTTGTG GCTAACACAC
ATGTCCCGCG TGATTATCGA TACCATTTCA GATCCCAATC TAGCGCAATA TCAACAAGGC
AGCGTTTTGG CGTTTTTACC CGGTAAAGGT GAGATCCGTA AATTAGCTGG ATTATTGCGT
GAGCGTTTAG ATGCATCATG GCTTATTTGT CCTATGTATG GCGACTTGTC GTCAGCGGAG
CAAGATCAAG CCATTCGTGC AGCAGAACCG GGTAAACGTA AAATAGTTCT CGCGACTAAT
GTGGCAGAAT CGAGTTTAAC GATTGAAGGC ATCACCCTTG TTATAGACAG CGGTTATCGA
CGTGAAGCGA GTTTTAACCC TAAAACCGGC GTGACACGCT TAGGGCTTAA GCGCATTAGC
CAGGCATCGG CTATTCAGCG TAGTGGCCGA GCTGGGCGCT TAGCAGCGGG TTATTGTGTG
CGTTTGTGGA GCCAAGAAGA ACAAGGGCGA ATGCGTAAAG TCGATGAGCC TGAAATTACG
CAAGCAGAAC TGACTTCGAT GGCGCTTGAT TGTGCTAATT GGGGCGCTAA ATCATTTGCT
GAATTATCGC TGCTCACACC GCCACCTACG ATCCACGAAC AAGTCGCTTG GCGATTACTT
ATTCAACTGG AATTAATCAA CCAGCAACAT AAGTTAACGC CACTTGGCCG AGAGGCTTAT
GCATTAGGTT GCCATCCACG CTTAGCGCAT ATGCTGCTTA AAGCTAAGCA ACTTGCCTTG
CACGACAATC AGCCGCAACT TTGCCTGCTG GCTTGCGTAT TAGCAGGCAT TATTGAAGCC
CGTGGACTAC CGAAAAAAGG CGCTGATATT CATCATTATT TGACCGAGGC TTTGCAGGGG
CAGATTAAAC AGCAAGTAAG GCAATGGCAA CAATCTTTGG CGATATCGGG ACAGGTCAAT
GAAGCAATAC GTAATGCTTC TACTCGTGAT ATTAGTTATT TGTTAGCACT TGCTTACCCT
GATCGTATTG CCAAAGCCCG TGGTCATGAA GGCTTTTTGT TAAGTAATGG TACGGGGGTG
ATGATCAATG CCGAAGACAG TTTGGCTCAT GAACCTTGGT TAGTGGTTGC TGACTTTCAA
GAGATGCAAG GTCGTAATGC TGGGCAAATT TACCTTGCGG CAAGGTTAGA TGAACGCTTG
TTTACTGCAG AACTTGCCTC GTTAGTGACC ACTCATGTTC ACGGTGGTTG GGATGAAGCA
AAAGGGCGTT TCTTTGCTGA AAAGCACACC AAAATCGGTG AGGTTATCAT TAAAATCGAC
ACCGGTATTA CACCTGAACG AGCACACATT ACCGCCGCAT TAGTAGCGCA AATCCGTATA
AAAGGGTTAA CAATCCTTAA TCGTGATGAT CTGTTAATCC AGTTACAATA TCGGGTTGAA
TTAGCTCGAT ACTTTGCGCC AGAGCATGAT TGGCCTTGTT TAAGCGATGA GTACTTGCTG
GCTACATTAG AAGATTGGCT TGGGCCGCAT TTAGACAACA TTCGTTCATT GGCCGCATTG
TCTAAAGTAG GCGCGTATGG ATTGGTGAAA AATTTACTCA ATTGGCAACA GCAACAGCTA
TTAGATCAAC TGGTGCCAAC ACATTGGCCG ATGGCAACTG GCACACGTGC CCCCGTCCGT
TACCAGATGC CACTTGATAC AGACGGACAT TTTTATCATA ACAACGAACA GCAAGGCCGT
GCGTTGCTTA GTGTACGTTT ACAAGAAGCA TTAGGAATGG CGCAAAGCCC GACAATATTA
CACGGCAAAA TGACGGTTAC TATGGAGTTG TTGTCGCCAG CACAACGACC ATTAGCCGCC
ACGGCAGATT TAGCCAGCTT TTGGCAAGGG CCATATATTG ATGTAAAAAA AGAAATGCGC
GGTCGTTATC CTAGGCATTT ATGGCCTGAT GACCCAGTGA ACACTGTGGC AACAAAATTT
ACTAAAAAGA AAACTCCAGG CGTGTAA
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| Protein sequence | MTTTLPIHAV LDSLRVQFSA HSHIIIEAPT GAGKSTALPL AMLAWPEIRG KILMLEPRRV
AARNVAKFIA QQLGQNVGQQ VGYRVRGESK VSADTRLEIV TEGILTRMIQ QDPELSGIDV
IIFDEIHERH LTTDLGLALA LEVQQSLRDD LHIIAMSATL SGLPLDTLMP DAAQIHSDGR
SFEVEIAYQP CPGQQLWLTH MSRVIIDTIS DPNLAQYQQG SVLAFLPGKG EIRKLAGLLR
ERLDASWLIC PMYGDLSSAE QDQAIRAAEP GKRKIVLATN VAESSLTIEG ITLVIDSGYR
REASFNPKTG VTRLGLKRIS QASAIQRSGR AGRLAAGYCV RLWSQEEQGR MRKVDEPEIT
QAELTSMALD CANWGAKSFA ELSLLTPPPT IHEQVAWRLL IQLELINQQH KLTPLGREAY
ALGCHPRLAH MLLKAKQLAL HDNQPQLCLL ACVLAGIIEA RGLPKKGADI HHYLTEALQG
QIKQQVRQWQ QSLAISGQVN EAIRNASTRD ISYLLALAYP DRIAKARGHE GFLLSNGTGV
MINAEDSLAH EPWLVVADFQ EMQGRNAGQI YLAARLDERL FTAELASLVT THVHGGWDEA
KGRFFAEKHT KIGEVIIKID TGITPERAHI TAALVAQIRI KGLTILNRDD LLIQLQYRVE
LARYFAPEHD WPCLSDEYLL ATLEDWLGPH LDNIRSLAAL SKVGAYGLVK NLLNWQQQQL
LDQLVPTHWP MATGTRAPVR YQMPLDTDGH FYHNNEQQGR ALLSVRLQEA LGMAQSPTIL
HGKMTVTMEL LSPAQRPLAA TADLASFWQG PYIDVKKEMR GRYPRHLWPD DPVNTVATKF
TKKKTPGV
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