Gene Sfri_3252 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_3252 
Symbol 
ID4280154 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand
Start bp3889989 
End bp3890474 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content43% 
IMG OID638136070 
Producttranscriptional regulator, MarR family protein 
Protein accessionYP_751927 
Protein GI114564413 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCCAAG AATTAGAAAG ATTAAAAGAA CTGTCTCTAG CTGAAAATTT AGGTCGATTG 
CACCGCTTAT GGCGAACGGC TGCCGATGCA GAATTAATCC CGCTAGGTCT TACTCATCCT
CGCTGGACAG CATTGTGGAA GTTATTGCGC TTAGGGGACA ACGTCAGCCA AAAGGTGCTT
GCAGATGCGT TAGAAATTGA ATTGCCATCA TTAATGCGCA CCCTTAATCA ATTAGAAGAG
CAGGGCTATA TGCAACGCCA TTGCTGCGAA AAAGATAAAC GGGCACGCAT TGTCAGCTTA
ACCCCTGATG GGATTGAGAT GCTTAAGCAG ATGGAAAGTA AAATCATGCT AGTGCGACGT
AATTTATTAG CCGGCATTAG CAGCCAAGAA TTAAGTGAAT TTGAACGTGT CATCAGTCTG
ATCAGTGATA ACGCTCTTGC TGTGCTGCAT AAGAACACTG AACAAGACAA CAAAATTCCC
AAATGA
 
Protein sequence
MSQELERLKE LSLAENLGRL HRLWRTAADA ELIPLGLTHP RWTALWKLLR LGDNVSQKVL 
ADALEIELPS LMRTLNQLEE QGYMQRHCCE KDKRARIVSL TPDGIEMLKQ MESKIMLVRR
NLLAGISSQE LSEFERVISL ISDNALAVLH KNTEQDNKIP K