| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_3249 |
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| Symbol | |
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| ID | 4280151 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 3886670 |
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| End bp | 3887539 |
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| Gene Length | 870 bp |
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| Protein Length | 289 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 638136067 |
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| Product | Sel1 domain-containing protein |
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| Protein accession | YP_751924 |
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| Protein GI | 114564410 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0790] FOG: TPR repeat, SEL1 subfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGAAAC AAAATGCTAT TATTTTGAGC TTAATATTAA GCTTTCTCGC TTTCGCTCCA
TTTAAAAGCC ATGCAAACCA ATTGCCTGAG TGCAACACGT CTGAATGTAT TGAATACTTT
AAAGCCTACC GCATTTTAAC TAAACGAGGT CACTCCTCTG CAATGGCCAT GTTAGGTGAA
TTATATTACT CTGGTTATGG TACTGATAAA GATTTAGACA TGGCGTTGAA ATGGTACCGA
CGTGCAGGTA AGTATGGTGT GTTGGACGCA AAATATAAGG CGGGTGTTTT GTATTTACAA
GATACTCCTT TGAAAGATGT CGACGAGGGT ATCGATTTTT TAAAGTATGC TTCAAAACTG
GGTCACGCAC AGTCGTCATT TTTGCTAGGT AAAATATATT TAGGTGGTGG CATGGTAGAA
CAAGATTTGG CACTTGCAGA TCAATACCTT GCTAGAGCTT ATGAAGAAAA TAATTTAGCA
GCCAGAAATT ATGGGCAAAT ACTTTACTTA CATGAATCAA CTAAAGATTT ACCGTTTAGC
AAACTTTACG CTTTGATTTC GCAGGATGTT GTTCAATTAA ATCCTCAAGG TACTGATAAA
AATATACAAA CGGCAGCGGT TGTTTTTCCT CAAGGTGAAA TGGAAACCAT TGACGTGCAG
ATGGATACAT TTGAAGACAT GTTTGGCTCA CATATCGCAC AATTAAATCA TATGCTACCT
GACACTTCAA AAGGTACCGG ATCAAATATC GCTGGGCAGA CGTGTGCTAG AATGTGGGGG
TGCAGCAGCG AAGGCGATGG CCAACGAATT CAGGATGTAA TGTTATCTGA TTGGGGTTTG
GAAACGCTAC AGTTCAGATT AATAGAATAG
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| Protein sequence | MMKQNAIILS LILSFLAFAP FKSHANQLPE CNTSECIEYF KAYRILTKRG HSSAMAMLGE
LYYSGYGTDK DLDMALKWYR RAGKYGVLDA KYKAGVLYLQ DTPLKDVDEG IDFLKYASKL
GHAQSSFLLG KIYLGGGMVE QDLALADQYL ARAYEENNLA ARNYGQILYL HESTKDLPFS
KLYALISQDV VQLNPQGTDK NIQTAAVVFP QGEMETIDVQ MDTFEDMFGS HIAQLNHMLP
DTSKGTGSNI AGQTCARMWG CSSEGDGQRI QDVMLSDWGL ETLQFRLIE
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