| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_3247 |
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| Symbol | |
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| ID | 4280149 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 3885667 |
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| End bp | 3886272 |
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| Gene Length | 606 bp |
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| Protein Length | 201 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 638136065 |
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| Product | HAD family hydrolase |
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| Protein accession | YP_751922 |
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| Protein GI | 114564408 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0546] Predicted phosphatases |
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| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAATTTAC CAATACACAT AAAAGGCATT ATTTTCGACT TAGACGGCAC CTTAGTTGAG
TCCAGTTTAG ACTTTGACTT AATTCGCCAA CAAATTGGTT GCCCTAATGG TATAGACCTC
CTTAAATACG TCGATGAGTT AAGCTGCAAA GCCACTCAAG CCAACGCAAA CAAGATTATT
CTTGAGCATG AATATCAAGA TGCTATAAGT GCCAAACCAA TCAAAGGCAT GACCGAACTA
ATTAACGCTA TTGAAGCAGC AAAATTACCT ACCGCCATAG TGACTCGTAA CAGCCTTGCT
GCCAGTGCAA TGAAGATAAC ACAAAATAAT ATTGCCATAG ATCACGTGCT AACCAGAGAA
CACTTCCCAG CCAAGCCGGC ACCCGATGCG TTACTGGCCA TTGCAACACA ATGGCAAATT
AATCCGCAGC ACATTATCTA TGTTGGTGAT TACTTATACG ATATTCAAGC GGCTAACAAC
GCGGGAATGA TTGCCTGTTT AATTAATCAT GGCATTGAAC GTGATTATCA ACACTTAGCC
GATATTGTCA TCGAAGAGTT AAGCCAACTG CAGACATTAT TAATCAATAA CTCAACGAGC
GATTAA
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| Protein sequence | MNLPIHIKGI IFDLDGTLVE SSLDFDLIRQ QIGCPNGIDL LKYVDELSCK ATQANANKII
LEHEYQDAIS AKPIKGMTEL INAIEAAKLP TAIVTRNSLA ASAMKITQNN IAIDHVLTRE
HFPAKPAPDA LLAIATQWQI NPQHIIYVGD YLYDIQAANN AGMIACLINH GIERDYQHLA
DIVIEELSQL QTLLINNSTS D
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